Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0537.Seq
         (947 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81147-3|CAB03530.1|  305|Caenorhabditis elegans Hypothetical pr...    29   4.9  

>Z81147-3|CAB03530.1|  305|Caenorhabditis elegans Hypothetical
           protein T09E11.3 protein.
          Length = 305

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = -3

Query: 426 EDDRTKEADAAKESRPSVMRRTTQGGEGPYCQ-FMHRLKFFSYYIACTVKTSKIMF 262
           E  +T E + +  S    ++   Q  E PY Q  +H++ FF Y +    K  KI F
Sbjct: 233 EGMKTGETEHSTHSSTGRIKAERQVREDPYIQNLLHKIYFFDYLVFPFTKDFKIPF 288


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,691,196
Number of Sequences: 27780
Number of extensions: 389166
Number of successful extensions: 1197
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)