Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0536.Seq
(881 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P45135 Cluster: Protein mrp homolog; n=82; Proteobacter... 79 2e-13
UniRef50_Q9KT68 Cluster: Mrp protein; n=21; Vibrionaceae|Rep: Mr... 70 7e-11
UniRef50_A0KKF7 Cluster: Mrp protein; n=3; Gammaproteobacteria|R... 54 6e-06
UniRef50_A1RIY1 Cluster: ATP-binding protein, Mrp/Nbp35 family; ... 52 1e-05
UniRef50_Q21I22 Cluster: ParA family protein; n=1; Saccharophagu... 50 8e-05
UniRef50_Q60CU7 Cluster: MrP protein; n=16; cellular organisms|R... 50 1e-04
UniRef50_P67270 Cluster: UPF0135 protein ybgI; n=76; Proteobacte... 45 0.002
UniRef50_Q5R0F3 Cluster: ATPase involved in chromosome partition... 43 0.009
UniRef50_Q5P237 Cluster: Mrp-ATPases involved in chromosome part... 42 0.027
UniRef50_Q8YEJ1 Cluster: MRP PROTEIN; n=49; Proteobacteria|Rep: ... 41 0.048
UniRef50_A6VVJ6 Cluster: ParA family protein; n=2; Marinomonas|R... 41 0.048
UniRef50_Q0EZF4 Cluster: MrP protein; n=4; Bacteria|Rep: MrP pro... 40 0.063
UniRef50_Q57354 Cluster: UPF0135 protein HI0105; n=22; Gammaprot... 40 0.084
UniRef50_A4B6F2 Cluster: ATP-binding protein, Mrp/Nbp35 family; ... 40 0.11
UniRef50_A2XJS6 Cluster: Putative uncharacterized protein; n=2; ... 40 0.11
UniRef50_P53383 Cluster: Protein mrp homolog; n=11; Bacteria|Rep... 40 0.11
UniRef50_Q8TB37 Cluster: Nucleotide-binding protein-like; n=27; ... 39 0.19
UniRef50_A3YBU9 Cluster: NIF3-related protein; n=2; Gammaproteob... 38 0.26
UniRef50_A0Y8F4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.26
UniRef50_A0NY75 Cluster: Mrp/NBP35 family protein; n=5; Rhodobac... 38 0.26
UniRef50_Q1ZFN5 Cluster: Putative ATPase; n=2; Psychromonas|Rep:... 38 0.34
UniRef50_UPI00015ADE26 Cluster: hypothetical protein NEMVEDRAFT_... 38 0.45
UniRef50_Q5FR17 Cluster: GTP-binding protein; n=1; Gluconobacter... 38 0.45
UniRef50_Q1QVE7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.45
UniRef50_O49472 Cluster: ATP binding protein-like; n=4; core eud... 38 0.45
UniRef50_Q2ACQ6 Cluster: ATPases involved in chromosome partitio... 37 0.59
UniRef50_Q9JWG6 Cluster: UPF0135 protein NMA0382; n=16; Betaprot... 37 0.59
UniRef50_Q4SRM8 Cluster: Chromosome undetermined SCAF14509, whol... 37 0.78
UniRef50_Q2SBJ9 Cluster: Uncharacterized conserved protein; n=8;... 37 0.78
UniRef50_A0L8B8 Cluster: MRP ATP/GTP-binding protein; n=1; Magne... 36 1.0
UniRef50_P72190 Cluster: Uncharacterized ATP-binding protein in ... 36 1.0
UniRef50_Q2S4C5 Cluster: Mrp protein; n=1; Salinibacter ruber DS... 36 1.4
UniRef50_Q4PJG4 Cluster: Predicted ATPase; n=3; Bacteria|Rep: Pr... 36 1.4
UniRef50_Q9RVM9 Cluster: Protein mrp homolog; n=12; Bacteria|Rep... 36 1.4
UniRef50_Q8D2D0 Cluster: YbgI protein; n=2; Gammaproteobacteria|... 35 2.4
UniRef50_Q54F15 Cluster: Mrp/NBP35 family protein; n=1; Dictyost... 35 2.4
UniRef50_Q7S6P7 Cluster: Putative uncharacterized protein NCU047... 35 2.4
UniRef50_Q9HP80 Cluster: UPF0135 protein VNG1766C; n=4; Halobact... 35 2.4
UniRef50_A1RYM9 Cluster: MRP protein-like; n=1; Thermofilum pend... 35 3.2
UniRef50_Q2JWT8 Cluster: CobQ/CobB/MinD/ParA nucleotide binding ... 34 4.2
UniRef50_Q30C84 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_A0Z7E8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_A0L5G9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q9KQA7 Cluster: UPF0135 protein VC_2093; n=94; Proteoba... 33 7.3
UniRef50_Q609U6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_A6DBZ1 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
>UniRef50_P45135 Cluster: Protein mrp homolog; n=82;
Proteobacteria|Rep: Protein mrp homolog - Haemophilus
influenzae
Length = 370
Score = 78.6 bits (185), Expect = 2e-13
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV 176
Q+PLHI +REDLD G PTV+ PE+E + + QLA++V+ +LYWQG VIP EI F+ V
Sbjct: 312 QLPLHIRIREDLDAGNPTVVRVPENEISQAFLQLAEKVSTELYWQGSVIPSEILFKEV 369
>UniRef50_Q9KT68 Cluster: Mrp protein; n=21; Vibrionaceae|Rep: Mrp
protein - Vibrio cholerae
Length = 382
Score = 70.1 bits (164), Expect = 7e-11
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV 176
Q+PLHI +RED+D G PTV++RP SE T Y LA RV A L+WQG+ P I + V
Sbjct: 324 QIPLHIDMREDIDAGVPTVVARPNSEHTERYLALAQRVCASLFWQGKAKPESIQIQWV 381
>UniRef50_A0KKF7 Cluster: Mrp protein; n=3; Gammaproteobacteria|Rep:
Mrp protein - Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / NCIB 9240)
Length = 360
Score = 53.6 bits (123), Expect = 6e-06
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQGEVI 149
Q+PLHI +R+ +D G PTV P E Y +LA RV A+LY+ G+ I
Sbjct: 301 QLPLHIDIRQHMDDGCPTVFGAPSGELAEAYLKLARRVGAELYFSGKPI 349
>UniRef50_A1RIY1 Cluster: ATP-binding protein, Mrp/Nbp35 family;
n=17; Shewanella|Rep: ATP-binding protein, Mrp/Nbp35
family - Shewanella sp. (strain W3-18-1)
Length = 373
Score = 52.4 bits (120), Expect = 1e-05
Identities = 20/41 (48%), Positives = 32/41 (78%)
Frame = +3
Query: 6 MPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
+PLHI++RE +D G PTV++ P+SE +YR++A +V A+L
Sbjct: 316 LPLHINIREAMDVGAPTVVAAPDSEVAGLYREIARKVGAEL 356
>UniRef50_Q21I22 Cluster: ParA family protein; n=1; Saccharophagus
degradans 2-40|Rep: ParA family protein - Saccharophagus
degradans (strain 2-40 / ATCC 43961 / DSM 17024)
Length = 360
Score = 50.0 bits (114), Expect = 8e-05
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQGEVIPG--EISF 167
++PL + +RE D+G P V + PES+ + IYR++A ++ L+ QG P EISF
Sbjct: 301 RLPLQLDIREQTDQGKPPVATNPESDVSLIYREIATQMTVNLWRQGLAAPAAPEISF 357
>UniRef50_Q60CU7 Cluster: MrP protein; n=16; cellular organisms|Rep:
MrP protein - Methylococcus capsulatus
Length = 361
Score = 49.6 bits (113), Expect = 1e-04
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
Q+PL S+RED D G PTVI+ P+SE +YR +A +VAA+L
Sbjct: 301 QLPLDRSIREDADGGRPTVIAAPDSEPARMYRSIARKVAARL 342
>UniRef50_P67270 Cluster: UPF0135 protein ybgI; n=76;
Proteobacteria|Rep: UPF0135 protein ybgI - Salmonella
typhimurium
Length = 247
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = +1
Query: 472 TDHSFSPRAGIAFYAAGHHATERGGIRAXSE 564
T HS + G+ FYAAGHHATERGGIRA SE
Sbjct: 199 TIHS-AREQGLHFYAAGHHATERGGIRALSE 228
Score = 43.2 bits (97), Expect = 0.009
Identities = 22/42 (52%), Positives = 24/42 (57%)
Frame = +2
Query: 452 LAGEVSEQTIHSAREQGLHFMLQVTMPLNVVVFAHXASWLNE 577
+ GEVSEQTIHSAREQGLHF + WLNE
Sbjct: 191 ITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNE 232
>UniRef50_Q5R0F3 Cluster: ATPase involved in chromosome
partitioning; n=2; Idiomarina|Rep: ATPase involved in
chromosome partitioning - Idiomarina loihiensis
Length = 327
Score = 43.2 bits (97), Expect = 0.009
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQGE 143
Q PL+ LRE LD TP ++++PE + + A +VAA+LY+Q E
Sbjct: 278 QWPLNSELRESLDGDTPLLLAQPEHPLSQLILNSAQQVAAKLYYQQE 324
>UniRef50_Q5P237 Cluster: Mrp-ATPases involved in chromosome
partitioning; n=52; Proteobacteria|Rep: Mrp-ATPases
involved in chromosome partitioning - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 363
Score = 41.5 bits (93), Expect = 0.027
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = +3
Query: 6 MPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
+PL + +R++ D G PTV+S P+ +Y+ +A +VAA++
Sbjct: 304 LPLDLQIRQETDGGAPTVVSDPDGRIAELYKAIARKVAARV 344
>UniRef50_Q8YEJ1 Cluster: MRP PROTEIN; n=49; Proteobacteria|Rep: MRP
PROTEIN - Brucella melitensis
Length = 394
Score = 40.7 bits (91), Expect = 0.048
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRV 116
++PLH+ +R D GTP + P+SE IYR +A +V
Sbjct: 337 EVPLHMDVRAYSDNGTPITVKEPDSEHAKIYRDIARKV 374
>UniRef50_A6VVJ6 Cluster: ParA family protein; n=2; Marinomonas|Rep:
ParA family protein - Marinomonas sp. MWYL1
Length = 356
Score = 40.7 bits (91), Expect = 0.048
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
++PL +++RE D G P V++ PES+ IY+ +A ++ A L
Sbjct: 297 KLPLSLAIREQSDAGRPIVVNAPESDTAGIYQSIARKLGATL 338
>UniRef50_Q0EZF4 Cluster: MrP protein; n=4; Bacteria|Rep: MrP
protein - Mariprofundus ferrooxydans PV-1
Length = 358
Score = 40.3 bits (90), Expect = 0.063
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3
Query: 6 MPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
+PL + +RE D GTP V + P+SE YRQLA +A ++
Sbjct: 302 IPLDMRIRELSDSGTPVVAALPDSEQAVAYRQLAGEIARKI 342
>UniRef50_Q57354 Cluster: UPF0135 protein HI0105; n=22;
Gammaproteobacteria|Rep: UPF0135 protein HI0105 -
Haemophilus influenzae
Length = 251
Score = 39.9 bits (89), Expect = 0.084
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +2
Query: 452 LAGEVSEQTIHSAREQGLHF 511
+ GEVSEQTIHSAREQGL+F
Sbjct: 195 ITGEVSEQTIHSAREQGLYF 214
Score = 35.9 bits (79), Expect = 1.4
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1
Query: 472 TDHSFSPRAGIAFYAAGHHATERGGIRAXSE 564
T HS + G+ F++AGHHATER GI+A E
Sbjct: 203 TIHS-AREQGLYFFSAGHHATERYGIKALGE 232
>UniRef50_A4B6F2 Cluster: ATP-binding protein, Mrp/Nbp35 family;
n=2; Alteromonadales|Rep: ATP-binding protein, Mrp/Nbp35
family - Alteromonas macleodii 'Deep ecotype'
Length = 368
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
Q+PL I +RE D GTP +I+ P+S + YR+ A ++ QL
Sbjct: 302 QLPLDIHIREHGDAGTPLLITSPDSPLSESYREAARALSMQL 343
>UniRef50_A2XJS6 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 264
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
++PL I +R D+GTP VIS P+S Y Q+A++V +L
Sbjct: 208 EIPLEIDIRTGSDEGTPIVISSPDSASAQAYIQVAEKVIHRL 249
>UniRef50_P53383 Cluster: Protein mrp homolog; n=11; Bacteria|Rep:
Protein mrp homolog - Synechocystis sp. (strain PCC
6803)
Length = 353
Score = 39.5 bits (88), Expect = 0.11
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Frame = +3
Query: 6 MPLHISLREDLDKGTPTVISRPES----EFTAIYRQLADRVA 119
+PL I LRE DKG P V+S+PES TAI +Q+A +V+
Sbjct: 307 VPLEIGLREGGDKGVPIVVSQPESASAKALTAIAKQIAGKVS 348
>UniRef50_Q8TB37 Cluster: Nucleotide-binding protein-like; n=27;
Eukaryota|Rep: Nucleotide-binding protein-like - Homo
sapiens (Human)
Length = 319
Score = 38.7 bits (86), Expect = 0.19
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 6 MPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
+PLH+++RE D G P V S+PES+ Y ++A V +L
Sbjct: 274 IPLHLNIREASDTGQPIVFSQPESDEAKAYLRIAVEVVRRL 314
>UniRef50_A3YBU9 Cluster: NIF3-related protein; n=2;
Gammaproteobacteria|Rep: NIF3-related protein -
Marinomonas sp. MED121
Length = 259
Score = 38.3 bits (85), Expect = 0.26
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +2
Query: 452 LAGEVSEQTIHSAREQGLHFM 514
L GEVSEQTIH ARE G+HF+
Sbjct: 203 LTGEVSEQTIHLAREHGIHFV 223
>UniRef50_A0Y8F4 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 360
Score = 38.3 bits (85), Expect = 0.26
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 6 MPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLY 131
+PL +RE++D+G PTV+ P Y LA++VAA+L+
Sbjct: 302 LPLDSRIRENVDRGLPTVVCDPMGALANAYIALANQVAAKLW 343
>UniRef50_A0NY75 Cluster: Mrp/NBP35 family protein; n=5;
Rhodobacteraceae|Rep: Mrp/NBP35 family protein - Stappia
aggregata IAM 12614
Length = 369
Score = 38.3 bits (85), Expect = 0.26
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQ 125
++PLH+++R D GTP I PE+ +++RQLA + A+
Sbjct: 326 EVPLHLNIRLAGDGGTPIAIKTPEAPEASVFRQLARNLIAE 366
>UniRef50_Q1ZFN5 Cluster: Putative ATPase; n=2; Psychromonas|Rep:
Putative ATPase - Psychromonas sp. CNPT3
Length = 362
Score = 37.9 bits (84), Expect = 0.34
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 6 MPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV 176
+PLHI+ R D D+G PT++ + Y +LA+ + +LY + IS V
Sbjct: 304 LPLHINYRIDSDEGIPTLVKNEHAHLVQPYFELAETLVMRLYCDLQAASQSISIMQV 360
>UniRef50_UPI00015ADE26 Cluster: hypothetical protein
NEMVEDRAFT_v1g225725; n=1; Nematostella vectensis|Rep:
hypothetical protein NEMVEDRAFT_v1g225725 - Nematostella
vectensis
Length = 306
Score = 37.5 bits (83), Expect = 0.45
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 6 MPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
+PL +++R D G PT ++ PES+ IY++ A V A++
Sbjct: 36 LPLSMAIRMQSDGGKPTTVADPESQIAMIYQETARNVGARI 76
>UniRef50_Q5FR17 Cluster: GTP-binding protein; n=1; Gluconobacter
oxydans|Rep: GTP-binding protein - Gluconobacter oxydans
(Gluconobacter suboxydans)
Length = 399
Score = 37.5 bits (83), Expect = 0.45
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
++PL +R D+GTP ++S P+SE Y +LA VA L
Sbjct: 348 EIPLLADIRASGDEGTPIILSAPQSEAAQAYTRLAQAVARSL 389
>UniRef50_Q1QVE7 Cluster: Putative uncharacterized protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: Putative
uncharacterized protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 251
Score = 37.5 bits (83), Expect = 0.45
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +1
Query: 499 GIAFYAAGHHATERGGIRAXSE 564
G++++AAGHHATER G+RA +
Sbjct: 211 GVSYFAAGHHATERDGVRALGD 232
>UniRef50_O49472 Cluster: ATP binding protein-like; n=4; core
eudicotyledons|Rep: ATP binding protein-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 313
Score = 37.5 bits (83), Expect = 0.45
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
++PL +S+RE D+G P V+S P S + Y+ LA V L
Sbjct: 248 EIPLEMSIREGSDEGVPVVVSSPGSIVSKAYQDLAQNVVKGL 289
>UniRef50_Q2ACQ6 Cluster: ATPases involved in chromosome
partitioning; n=1; Halothermothrix orenii H 168|Rep:
ATPases involved in chromosome partitioning -
Halothermothrix orenii H 168
Length = 285
Score = 37.1 bits (82), Expect = 0.59
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRV 116
Q+PL +R+ D+G P +++ P SE T +Y +AD++
Sbjct: 222 QIPLEPEIRKLGDEGQPLILNNPGSEVTRVYNSIADKI 259
>UniRef50_Q9JWG6 Cluster: UPF0135 protein NMA0382; n=16;
Betaproteobacteria|Rep: UPF0135 protein NMA0382 -
Neisseria meningitidis serogroup A
Length = 249
Score = 37.1 bits (82), Expect = 0.59
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +1
Query: 499 GIAFYAAGHHATERGGIRAXSELA 570
G AF +AGHHATER G+RA +E A
Sbjct: 209 GTAFISAGHHATERYGVRALAESA 232
>UniRef50_Q4SRM8 Cluster: Chromosome undetermined SCAF14509, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14509, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 274
Score = 36.7 bits (81), Expect = 0.78
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +3
Query: 6 MPLHISLREDLDKGTPTVISRPES 77
+PLH+++RE D+GTP VIS P+S
Sbjct: 249 VPLHLNIRETSDRGTPIVISSPDS 272
>UniRef50_Q2SBJ9 Cluster: Uncharacterized conserved protein; n=8;
Proteobacteria|Rep: Uncharacterized conserved protein -
Hahella chejuensis (strain KCTC 2396)
Length = 253
Score = 36.7 bits (81), Expect = 0.78
Identities = 14/21 (66%), Positives = 20/21 (95%)
Frame = +2
Query: 452 LAGEVSEQTIHSAREQGLHFM 514
L+GE+SEQT+HSAREQG+ ++
Sbjct: 197 LSGEISEQTVHSAREQGIVYV 217
Score = 34.3 bits (75), Expect = 4.2
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 472 TDHSFSPRAGIAFYAAGHHATERGGIRAXSE-LAE 573
T HS + GI + AAGHHATER G++A + LAE
Sbjct: 205 TVHS-AREQGIVYVAAGHHATERYGVQALGKALAE 238
>UniRef50_A0L8B8 Cluster: MRP ATP/GTP-binding protein; n=1;
Magnetococcus sp. MC-1|Rep: MRP ATP/GTP-binding protein
- Magnetococcus sp. (strain MC-1)
Length = 287
Score = 36.3 bits (80), Expect = 1.0
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQ 137
++PL ++RE D G P V+ +PESE Y ++A+++ A++ Q
Sbjct: 236 EVPLVPAIRECGDNGLPIVLEQPESEHAKRYMEIAEKLVARVVAQ 280
>UniRef50_P72190 Cluster: Uncharacterized ATP-binding protein in
capB 3'region; n=79; Bacteria|Rep: Uncharacterized
ATP-binding protein in capB 3'region - Pseudomonas fragi
Length = 287
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 6 MPLHISLREDLDKGTPTVISRPESEFTAIYRQLA 107
+PL + +RE D G PT I+ P S IY++LA
Sbjct: 246 LPLAMEIREQADNGKPTAIADPNSPIALIYQELA 279
>UniRef50_Q2S4C5 Cluster: Mrp protein; n=1; Salinibacter ruber DSM
13855|Rep: Mrp protein - Salinibacter ruber (strain DSM
13855)
Length = 374
Score = 35.9 bits (79), Expect = 1.4
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
++P+ +R+ D+GTP V S P+S T + ++AD++ Q+
Sbjct: 315 EVPIQQEIRKSSDQGTPIVRSAPDSASTQAFAEIADQLTEQV 356
>UniRef50_Q4PJG4 Cluster: Predicted ATPase; n=3; Bacteria|Rep:
Predicted ATPase - uncultured bacterium MedeBAC46A06
Length = 380
Score = 35.9 bits (79), Expect = 1.4
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRV 116
++PL + +R D GTP V++ P SE YR +A R+
Sbjct: 328 EIPLSLEVRTGGDSGTPVVVASPRSEQAKTYRSIARRL 365
>UniRef50_Q9RVM9 Cluster: Protein mrp homolog; n=12; Bacteria|Rep:
Protein mrp homolog - Deinococcus radiodurans
Length = 350
Score = 35.9 bits (79), Expect = 1.4
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
++PL + +R+D D G P +++ PES R +A +A Q+
Sbjct: 294 EIPLDVEVRKDADAGAPAILAHPESVAAQALRAVARTLAGQI 335
>UniRef50_Q8D2D0 Cluster: YbgI protein; n=2;
Gammaproteobacteria|Rep: YbgI protein - Wigglesworthia
glossinidia brevipalpis
Length = 249
Score = 35.1 bits (77), Expect = 2.4
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 487 SPRAGIAFYAAGHHATERGGIRA 555
S + FY+AGHHATE+GGI A
Sbjct: 205 SKERNVDFYSAGHHATEKGGILA 227
>UniRef50_Q54F15 Cluster: Mrp/NBP35 family protein; n=1;
Dictyostelium discoideum AX4|Rep: Mrp/NBP35 family
protein - Dictyostelium discoideum AX4
Length = 323
Score = 35.1 bits (77), Expect = 2.4
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 6 MPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
+P+H+ +RE D G P +++P+S Y+ ++ + QL
Sbjct: 264 VPIHLQIRETSDSGKPITVTQPDSPQAKNYKDISKEIIKQL 304
>UniRef50_Q7S6P7 Cluster: Putative uncharacterized protein
NCU04788.1; n=5; Pezizomycotina|Rep: Putative
uncharacterized protein NCU04788.1 - Neurospora crassa
Length = 309
Score = 35.1 bits (77), Expect = 2.4
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 6 MPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVA 119
+PLH S+ ED +G PTV+S P + ++ L RVA
Sbjct: 258 VPLHPSIGEDGGRGKPTVVSEPGGKEAEVFMGLGRRVA 295
>UniRef50_Q9HP80 Cluster: UPF0135 protein VNG1766C; n=4;
Halobacteriaceae|Rep: UPF0135 protein VNG1766C -
Halobacterium salinarium (Halobacterium halobium)
Length = 253
Score = 35.1 bits (77), Expect = 2.4
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 496 AGIAFYAAGHHATERGGIRAXSELAE 573
AG++ + AGH+ATE GG+RA +A+
Sbjct: 213 AGVSVFLAGHYATETGGVRALEAVAD 238
>UniRef50_A1RYM9 Cluster: MRP protein-like; n=1; Thermofilum pendens
Hrk 5|Rep: MRP protein-like - Thermofilum pendens
(strain Hrk 5)
Length = 291
Score = 34.7 bits (76), Expect = 3.2
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
++PL + E D G P V++ P+SE + +LAD V A L
Sbjct: 239 EIPLDPRINESADNGVPFVLAYPDSEAAKSFYKLADEVLAAL 280
>UniRef50_Q2JWT8 Cluster: CobQ/CobB/MinD/ParA nucleotide binding
domain protein; n=22; Cyanobacteria|Rep:
CobQ/CobB/MinD/ParA nucleotide binding domain protein -
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria
bacteriumYellowstone A-Prime)
Length = 360
Score = 34.3 bits (75), Expect = 4.2
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
++PL I+LR+ D G P V+ +PES +Q+A +A ++
Sbjct: 311 RIPLEIALRQGGDAGQPIVVGQPESASAQALQQIAKTLAGRV 352
>UniRef50_Q30C84 Cluster: Putative uncharacterized protein; n=1;
Operophtera brumata reovirus|Rep: Putative
uncharacterized protein - Operophtera brumata reovirus
Length = 1207
Score = 33.9 bits (74), Expect = 5.5
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 277 LRIFCGPSSE-TLQSRLIIQAMLHYHPSWLCSGCT-AIVCYALILSRHNLYY 426
LRIF P++ TL+ Q HY P+W C A++ YAL +SR YY
Sbjct: 370 LRIFAFPNTTITLEDEA--QYDFHYWPNWRREDCYGAVLMYALSVSRQKQYY 419
>UniRef50_A0Z7E8 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2080|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2080
Length = 251
Score = 33.9 bits (74), Expect = 5.5
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 452 LAGEVSEQTIHSAREQGLHFM 514
+ GEVSEQTIH ARE+G+ F+
Sbjct: 195 VTGEVSEQTIHVARERGISFI 215
Score = 33.5 bits (73), Expect = 7.3
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 499 GIAFYAAGHHATERGGIRA 555
GI+F AAGHHATER G+++
Sbjct: 211 GISFIAAGHHATERFGVQS 229
>UniRef50_A0L5G9 Cluster: Putative uncharacterized protein; n=1;
Magnetococcus sp. MC-1|Rep: Putative uncharacterized
protein - Magnetococcus sp. (strain MC-1)
Length = 357
Score = 33.5 bits (73), Expect = 7.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 6 MPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQL 128
+P+ +R+D D G P V++RP+S Y ++A V ++L
Sbjct: 302 IPISEDIRKDSDAGKPIVVARPDSPQAQQYLEIARNVVSKL 342
>UniRef50_Q9KQA7 Cluster: UPF0135 protein VC_2093; n=94;
Proteobacteria|Rep: UPF0135 protein VC_2093 - Vibrio
cholerae
Length = 252
Score = 33.5 bits (73), Expect = 7.3
Identities = 16/25 (64%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 502 IAFYAAGHHATERGGIRAXSE-LAE 573
I +++AGHHATER GI+A E LAE
Sbjct: 213 IHYFSAGHHATERYGIKALGEWLAE 237
>UniRef50_Q609U6 Cluster: Putative uncharacterized protein; n=1;
Methylococcus capsulatus|Rep: Putative uncharacterized
protein - Methylococcus capsulatus
Length = 255
Score = 33.1 bits (72), Expect = 9.6
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1
Query: 496 AGIAFYAAGHHATERGGIRAXSE 564
AGI YA GH+ATER GI+A E
Sbjct: 214 AGIHMYAGGHNATERFGIQALME 236
>UniRef50_A6DBZ1 Cluster: Putative uncharacterized protein; n=1;
Caminibacter mediatlanticus TB-2|Rep: Putative
uncharacterized protein - Caminibacter mediatlanticus
TB-2
Length = 372
Score = 33.1 bits (72), Expect = 9.6
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 3 QMPLHISLREDLDKGTPTVISRPESEFTAIYRQLA 107
++P+ ++RE DKG P V+SRP SE +++ A
Sbjct: 300 KIPIEPAIREGGDKGEPIVVSRPNSESAKEFQKAA 334
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 843,591,349
Number of Sequences: 1657284
Number of extensions: 16259614
Number of successful extensions: 30802
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 29884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30793
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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