Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0534.Seq
(958 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 74 5e-12
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 72 2e-11
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 72 3e-11
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 71 6e-11
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 53 1e-05
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 44 0.004
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 38 0.38
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 37 0.87
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 1.5
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 35 2.7
UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;... 34 6.2
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 33 8.2
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 74.1 bits (174), Expect = 5e-12
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1
Query: 517 NSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 612
NSLAVVLQRRDWENPGVTQLNRLAAHPPFASW
Sbjct: 20 NSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 51
Score = 37.5 bits (83), Expect = 0.50
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +3
Query: 597 PFRQLGNSEEARTDRPSQQLR 659
PF NSEEARTDRPSQQLR
Sbjct: 47 PFASWRNSEEARTDRPSQQLR 67
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 72.1 bits (169), Expect = 2e-11
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = +1
Query: 514 YNSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 612
Y LAVVLQRRDWENPGVTQLNRLAAHPPFASW
Sbjct: 65 YYGLAVVLQRRDWENPGVTQLNRLAAHPPFASW 97
Score = 41.1 bits (92), Expect = 0.041
Identities = 20/25 (80%), Positives = 20/25 (80%)
Frame = +3
Query: 597 PFRQLGNSEEARTDRPSQQLRXWNG 671
PF NSEEARTDRPSQQLR NG
Sbjct: 93 PFASWRNSEEARTDRPSQQLRXLNG 117
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 72.1 bits (169), Expect = 2e-11
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +1
Query: 517 NSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 612
+SLAVVLQRRDWENPGVTQLNRLAAHPPFASW
Sbjct: 6 DSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 37
Score = 41.1 bits (92), Expect = 0.041
Identities = 19/25 (76%), Positives = 19/25 (76%)
Frame = +3
Query: 597 PFRQLGNSEEARTDRPSQQLRXWNG 671
PF NSEEARTDRPSQQLR NG
Sbjct: 33 PFASWRNSEEARTDRPSQQLRSLNG 57
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 71.7 bits (168), Expect = 3e-11
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 521 HWPSFYNVVTGKTLALPNLIALQHIPLSPAG 613
HWPSFYNVVTGKTLALPNLIALQHIPLSPAG
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAG 35
Score = 33.9 bits (74), Expect = 6.2
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3
Query: 618 SEEARTDRPSQQLRXWNGRM 677
SEEARTDRPSQQLR RM
Sbjct: 38 SEEARTDRPSQQLRSLKWRM 57
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 70.5 bits (165), Expect = 6e-11
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +1
Query: 520 SLAVVLQRRDWENPGVTQLNRLAAHPPFASW 612
+LAVVLQRRDWENPGVTQLNRLAAHPPFASW
Sbjct: 25 ALAVVLQRRDWENPGVTQLNRLAAHPPFASW 55
Score = 41.1 bits (92), Expect = 0.041
Identities = 19/25 (76%), Positives = 19/25 (76%)
Frame = +3
Query: 597 PFRQLGNSEEARTDRPSQQLRXWNG 671
PF NSEEARTDRPSQQLR NG
Sbjct: 51 PFASWRNSEEARTDRPSQQLRSLNG 75
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 52.8 bits (121), Expect = 1e-05
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +1
Query: 520 SLAVVLQRRDWENPGVTQLNRLAAHPPFASW 612
SL +L RRDWENP +TQ +RL AHPPF SW
Sbjct: 14 SLPQILSRRDWENPQITQYHRLEAHPPFHSW 44
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 46.4 bits (105), Expect = 0.001
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 523 LAVVLQRRDWENPGVTQLNRLAAHPPFASWVIAKRPAPIALPNSCAXGM-GEW 678
LA +L R DW+NP +T +NRL +H P W A R A P+ + GEW
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPLHGWRDADR-ARRGEPSDAVLSLDGEW 69
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 44.4 bits (100), Expect = 0.004
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +1
Query: 532 VLQRRDWENPGVTQLNRLAAHPPFASW 612
VL R DW N +T LNRL AHP FASW
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASW 43
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 37.9 bits (84), Expect = 0.38
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 615 NSEEARTDRPSQQLRXWNG 671
NSEEARTDRPSQQLR NG
Sbjct: 49 NSEEARTDRPSQQLRSLNG 67
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 36.7 bits (81), Expect = 0.87
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 520 SLAVVLQRRDWENPGVTQLNRLAAHPP 600
SL ++ RRDWENP Q+N++ AH P
Sbjct: 3 SLQHIINRRDWENPITVQVNQVKAHSP 29
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 1.5
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 532 VLQRRDWENPGVTQLNRLAAHPP 600
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 35.1 bits (77), Expect = 2.7
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -3
Query: 668 IPXAQLLGRAIGAGLFAIT 612
I AQLLGRAIGAGLFAIT
Sbjct: 14 IQAAQLLGRAIGAGLFAIT 32
>UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 195
Score = 33.9 bits (74), Expect = 6.2
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 520 SLAVVLQRRDWENP 561
SLAVVLQRRDWENP
Sbjct: 178 SLAVVLQRRDWENP 191
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 33.5 bits (73), Expect = 8.2
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 487 TQFAL**AYYNSLAVVLQRRDWENPGVTQLNRLAA 591
TQ L ++ S V + DWENP V Q+NRL A
Sbjct: 13 TQVCLLFSFTGSAKTVQVKNDWENPDVIQINRLPA 47
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 946,348,463
Number of Sequences: 1657284
Number of extensions: 20063458
Number of successful extensions: 36832
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 35544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36823
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88590537959
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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