Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0534.Seq
         (958 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    28   0.12 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    25   1.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   8.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   8.1  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +1

Query: 298 TV*CLDTLKKYKCIHIYFNIGTQLIFHTI 384
           TV   ++L  Y+ + I F+IG+QL+ HT+
Sbjct: 363 TVDLFNSLFGYQTLLITFHIGSQLVLHTV 391


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 476 GGPVPNSPYSERITIHWPSFYNVV 547
           G P+P   Y+E  T  W S +N V
Sbjct: 246 GDPIPYIQYTETETKTWGSVFNTV 269


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 649 NSCAXGMGEWANC 687
           N C+ G+  WANC
Sbjct: 516 NDCSLGINPWANC 528


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 769  NLRFGLWVKKGADLTKI 719
            N     W++KGAD  KI
Sbjct: 2543 NFSLNYWIEKGADPGKI 2559


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 365 NLYFILYFRNPCPGENGKD 421
           N YF  +  NP P E  K+
Sbjct: 246 NEYFYSHLSNPYPSEEAKE 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,906
Number of Sequences: 336
Number of extensions: 5347
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26996013
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)