Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0530.Seq
         (939 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    26   1.4  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    25   2.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.8  
AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione S-tran...    24   5.8  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 27  IDTVDQQTKLSIILTFFYTIDTGQDIYF*SEVIKL-L*IVLYNACSN 164
           I+T+   TKL  + TF  T+D   D+ F  EV    L +  YN  SN
Sbjct: 23  INTISSATKLEALKTFIRTMDL--DVIFLQEVYHTDLALPGYNVLSN 67


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 746 THMGLLPALPNSATRGDHPPNLS 678
           TH  L P  PN  T GDH P ++
Sbjct: 731 THADLPPVPPNFPTCGDHLPPIN 753


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 661 PPLTNMLKFGG*SPLV 708
           PPL N+L FGG +P V
Sbjct: 611 PPLPNLLGFGGAAPPV 626


>AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione
           S-transferase D5 protein.
          Length = 216

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -1

Query: 660 KETN-QDFXSSGERTGI*PQH*IPLF*SITGDVVFGRFRFLV 538
           K+TN  D     E T + PQH IP F    G V++  +   +
Sbjct: 29  KKTNIMDATDVAELTKVNPQHLIPTFVEDDGHVIWESYAIAI 70


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 879,071
Number of Sequences: 2352
Number of extensions: 16855
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102535848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)