Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0530.Seq
         (939 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr...    31   2.3  
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ...    31   2.3  
DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ domain-c...    31   3.0  
DQ168460-1|AAZ81901.1|  197|Drosophila melanogaster BBG-LP15 pro...    31   3.0  
DQ168458-1|AAZ81899.1|  206|Drosophila melanogaster BBG-LP15 pro...    31   3.0  
DQ168457-1|AAZ81898.1|  174|Drosophila melanogaster BBG-LP15 pro...    31   3.0  
DQ168455-1|AAZ81894.1|  285|Drosophila melanogaster BBG-LP43 pro...    31   3.0  
DQ168453-1|AAZ81892.1|  237|Drosophila melanogaster BBG-LP29 pro...    31   3.0  
AE014296-2384|AAF49739.1| 1100|Drosophila melanogaster CG9598-PA...    31   3.0  
BT001270-1|AAN71026.1|  623|Drosophila melanogaster AT04551p pro...    29   7.0  
AY075167-1|AAL68037.2|  162|Drosophila melanogaster AT05678p pro...    29   7.0  
AE014298-121|AAF45562.1|  152|Drosophila melanogaster CG11663-PA...    29   7.0  
AE013599-3412|AAF46861.2| 1301|Drosophila melanogaster CG4294-PA...    29   7.0  

>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
            protein.
          Length = 5327

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 22/81 (27%), Positives = 38/81 (46%)
 Frame = +1

Query: 334  NHKSLIQAKKKLAVIFSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWHPLRENGPVK 513
            +  SL +AK++ +   SL  S+ P  G   K   + +  SR +  + ++  P R     +
Sbjct: 1462 DESSLDKAKEQESRRESLAESIKPESGIDEKSALASKEASRPESVTDKSKEPSRRESIAE 1521

Query: 514  TNLDRSRRDEKAEPPEHHISR 576
            +    S +DEK+ PP    SR
Sbjct: 1522 SLKAESTKDEKSAPPSKEASR 1542


>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
            protein.
          Length = 5412

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 22/81 (27%), Positives = 38/81 (46%)
 Frame = +1

Query: 334  NHKSLIQAKKKLAVIFSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWHPLRENGPVK 513
            +  SL +AK++ +   SL  S+ P  G   K   + +  SR +  + ++  P R     +
Sbjct: 1509 DESSLDKAKEQESRRESLAESIKPESGIDEKSALASKEASRPESVTDKSKEPSRRESIAE 1568

Query: 514  TNLDRSRRDEKAEPPEHHISR 576
            +    S +DEK+ PP    SR
Sbjct: 1569 SLKAESTKDEKSAPPSKEASR 1589


>DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ
            domain-containing proteinBBG-LP10 protein.
          Length = 1842

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = +1

Query: 334  NHKSLIQAKKKLAVIFSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWHPLRENGPVK 513
            +H       K+L V   L ++ PP    +   PD  E P     P +   HPL+    + 
Sbjct: 828  HHLHQATTTKQLLVQDYLSYASPPT--YSRLPPDGHEFPPNFSEPLIMHSHPLKVTTELS 885

Query: 514  TNLDRSRRDEKAEPP 558
              + +  +DE + PP
Sbjct: 886  YEIQKGGKDESSAPP 900


>DQ168460-1|AAZ81901.1|  197|Drosophila melanogaster BBG-LP15
           protein.
          Length = 197

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = +1

Query: 334 NHKSLIQAKKKLAVIFSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWHPLRENGPVK 513
           +H       K+L V   L ++ PP    +   PD  E P     P +   HPL+    + 
Sbjct: 19  HHLHQATTTKQLLVQDYLSYASPPT--YSRLPPDGHEFPPNFSEPLIMHSHPLKVTTELS 76

Query: 514 TNLDRSRRDEKAEPP 558
             + +  +DE + PP
Sbjct: 77  YEIQKGGKDESSAPP 91


>DQ168458-1|AAZ81899.1|  206|Drosophila melanogaster BBG-LP15
           protein.
          Length = 206

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = +1

Query: 334 NHKSLIQAKKKLAVIFSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWHPLRENGPVK 513
           +H       K+L V   L ++ PP    +   PD  E P     P +   HPL+    + 
Sbjct: 19  HHLHQATTTKQLLVQDYLSYASPPT--YSRLPPDGHEFPPNFSEPLIMHSHPLKVTTELS 76

Query: 514 TNLDRSRRDEKAEPP 558
             + +  +DE + PP
Sbjct: 77  YEIQKGGKDESSAPP 91


>DQ168457-1|AAZ81898.1|  174|Drosophila melanogaster BBG-LP15
           protein.
          Length = 174

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = +1

Query: 334 NHKSLIQAKKKLAVIFSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWHPLRENGPVK 513
           +H       K+L V   L ++ PP    +   PD  E P     P +   HPL+    + 
Sbjct: 19  HHLHQATTTKQLLVQDYLSYASPPT--YSRLPPDGHEFPPNFSEPLIMHSHPLKVTTELS 76

Query: 514 TNLDRSRRDEKAEPP 558
             + +  +DE + PP
Sbjct: 77  YEIQKGGKDESSAPP 91


>DQ168455-1|AAZ81894.1|  285|Drosophila melanogaster BBG-LP43
           protein.
          Length = 285

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = +1

Query: 334 NHKSLIQAKKKLAVIFSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWHPLRENGPVK 513
           +H       K+L V   L ++ PP    +   PD  E P     P +   HPL+    + 
Sbjct: 81  HHLHQATTTKQLLVQDYLSYASPPT--YSRLPPDGHEFPPNFSEPLIMHSHPLKVTTELS 138

Query: 514 TNLDRSRRDEKAEPP 558
             + +  +DE + PP
Sbjct: 139 YEIQKGGKDESSAPP 153


>DQ168453-1|AAZ81892.1|  237|Drosophila melanogaster BBG-LP29
           protein.
          Length = 237

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = +1

Query: 334 NHKSLIQAKKKLAVIFSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWHPLRENGPVK 513
           +H       K+L V   L ++ PP    +   PD  E P     P +   HPL+    + 
Sbjct: 87  HHLHQATTTKQLLVQDYLSYASPPT--YSRLPPDGHEFPPNFSEPLIMHSHPLKVTTELS 144

Query: 514 TNLDRSRRDEKAEPP 558
             + +  +DE + PP
Sbjct: 145 YEIQKGGKDESSAPP 159


>AE014296-2384|AAF49739.1| 1100|Drosophila melanogaster CG9598-PA
           protein.
          Length = 1100

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = +1

Query: 334 NHKSLIQAKKKLAVIFSLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWHPLRENGPVK 513
           +H       K+L V   L ++ PP    +   PD  E P     P +   HPL+    + 
Sbjct: 86  HHLHQATTTKQLLVQDYLSYASPPT--YSRLPPDGHEFPPNFSEPLIMHSHPLKVTTELS 143

Query: 514 TNLDRSRRDEKAEPP 558
             + +  +DE + PP
Sbjct: 144 YEIQKGGKDESSAPP 158


>BT001270-1|AAN71026.1|  623|Drosophila melanogaster AT04551p
           protein.
          Length = 623

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = +1

Query: 424 KQPDSKERPSRRDPPSLRAWHPLRENGPVKTNLDRSRRD-EKAEPPEHHISRYR--LKQR 594
           ++P  +  P R DP  L+      ++  +K +L R +RD E+A  P   I+R    +   
Sbjct: 203 EEPQEQNVPQREDPAELKLRLIALKSAILKKHLARKKRDAERAYSPTDMINRVHPAISND 262

Query: 595 DSVLGLYSCSLAATXE 642
           D +  L   S AA+ +
Sbjct: 263 DDIDDLMEISPAASPD 278


>AY075167-1|AAL68037.2|  162|Drosophila melanogaster AT05678p
           protein.
          Length = 162

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +2

Query: 404 PLRAALSSNPTLRSVPLAATLRRYGPGTLYGKTAPSRRTWTGVVATRKRNLPNTT 568
           P    L+S+P+  ++ LAA +    P     +  P RRT T  V T   N  + T
Sbjct: 73  PTATPLASHPSEDTLALAAAVAASIPAAPLARPLPDRRTTTPAVVTTTSNSSSET 127


>AE014298-121|AAF45562.1|  152|Drosophila melanogaster CG11663-PA
           protein.
          Length = 152

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +2

Query: 404 PLRAALSSNPTLRSVPLAATLRRYGPGTLYGKTAPSRRTWTGVVATRKRNLPNTT 568
           P    L+S+P+  ++ LAA +    P     +  P RRT T  V T   N  + T
Sbjct: 63  PTATPLASHPSEDTLALAAAVAASIPAAPLARPLPDRRTTTPAVVTTTSNSSSET 117


>AE013599-3412|AAF46861.2| 1301|Drosophila melanogaster CG4294-PA
           protein.
          Length = 1301

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = +1

Query: 424 KQPDSKERPSRRDPPSLRAWHPLRENGPVKTNLDRSRRD-EKAEPPEHHISRYR--LKQR 594
           ++P  +  P R DP  L+      ++  +K +L R +RD E+A  P   I+R    +   
Sbjct: 302 EEPQEQNVPQREDPAELKLRLIALKSAILKKHLARKKRDAERAYSPTDMINRVHPAISND 361

Query: 595 DSVLGLYSCSLAATXE 642
           D +  L   S AA+ +
Sbjct: 362 DDIDDLMEISPAASPD 377


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,502,826
Number of Sequences: 53049
Number of extensions: 775345
Number of successful extensions: 1846
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1846
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4648779081
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)