Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0528.Seq
         (964 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     25   2.6  
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    25   2.6  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   3.4  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   3.4  
AJ973476-1|CAJ01523.1|  126|Anopheles gambiae hypothetical prote...    25   4.5  
AJ697729-1|CAG26922.1|  126|Anopheles gambiae putative sensory a...    25   4.5  

>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 490 SSRRSSSHPGVRSAQGHDPHPIG 558
           SS  SSSH   ++   H+PH IG
Sbjct: 340 SSNNSSSHSHSQAQPHHNPHHIG 362


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +1

Query: 457 ALVQLEKHAKLSSRRSSSHPGVRSAQGHDPHPIGYRCPRSEG 582
           +LV +    KL  R SS     R   GHD H   +R   S+G
Sbjct: 106 SLVDMIPEEKLRGRHSSESD--REGMGHDSHKRTHRLSDSDG 145


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = +3

Query: 183  NCLHQIQGHVATGLHF--QEGHFPDLDVVEVTKNGAGND 293
            NC H +   V    +F  Q+ HF + D     KNG G D
Sbjct: 1681 NCWHVVLHTVKPDYYFYGQDSHFMNSDYEYNWKNGFGED 1719


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -3

Query: 89  PRSRRGRGRPNTPLYWTPFFSDSYWC 12
           PRSR        P    PFF  S+WC
Sbjct: 289 PRSRPTSKPKRLPRRRRPFFFSSWWC 314


>AJ973476-1|CAJ01523.1|  126|Anopheles gambiae hypothetical protein
           protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 47  KVVCLVALALFGSVAAQPAKDAFWKGTPMDSMVEEMR 157
           K   +VALAL  +VAAQ      + G  +D +++  R
Sbjct: 2   KFFVVVALALVAAVAAQDKYTTKYDGVDLDEILKSDR 38


>AJ697729-1|CAG26922.1|  126|Anopheles gambiae putative sensory
           appendage protein SAP-3 protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 47  KVVCLVALALFGSVAAQPAKDAFWKGTPMDSMVEEMR 157
           K   +VALAL  +VAAQ      + G  +D +++  R
Sbjct: 2   KFFVVVALALVAAVAAQDKYTTKYDGVDLDEILKSDR 38


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 935,165
Number of Sequences: 2352
Number of extensions: 18430
Number of successful extensions: 49
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105843456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)