Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0526.Seq
(826 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 26 0.32
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 24 1.3
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 23 2.9
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 2.9
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.9
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.9
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 22 6.8
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 22 6.8
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 6.8
AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase l... 22 6.8
DQ855493-1|ABH88180.1| 127|Tribolium castaneum chemosensory pro... 21 9.0
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 26.2 bits (55), Expect = 0.32
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 719 GEXYNLKLDYR*TIQSIKPSALCTLIKERRHSVLDA 826
G+ Y +K+D R ++K LC LI+ +LD+
Sbjct: 243 GQIYGIKVDIRDAYGNVKIPVLCKLIQSIPTHLLDS 278
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 24.2 bits (50), Expect = 1.3
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +1
Query: 268 FWKCWQRTALMSLC 309
+W CW TA LC
Sbjct: 115 YWTCWNGTATEQLC 128
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 600 SRFVEGLADIVDMAAIQKAGLTL 668
+ +VE LA I+D AA + G T+
Sbjct: 59 NEYVESLASIIDEAATKVHGTTV 81
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 600 SRFVEGLADIVDMAAIQKAGLTL 668
+ +VE LA I+D AA + G T+
Sbjct: 373 NEYVESLASIIDEAATKVHGTTV 395
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 600 SRFVEGLADIVDMAAIQKAGLTL 668
+ +VE LA I+D AA + G T+
Sbjct: 606 NEYVESLASIIDEAATKVHGTTV 628
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 600 SRFVEGLADIVDMAAIQKAGLTL 668
+ +VE LA I+D AA + G T+
Sbjct: 606 NEYVESLASIIDEAATKVHGTTV 628
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +1
Query: 268 FWKCWQRTALMSLCRKTMASPR 333
FW CW A C +A R
Sbjct: 111 FWNCWNGEASRYQCSPGLAYDR 132
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +1
Query: 268 FWKCWQRTALMSLCRKTMASPR 333
FW CW A C +A R
Sbjct: 111 FWNCWNGEASRYQCSPGLAYDR 132
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 6.8
Identities = 4/11 (36%), Positives = 7/11 (63%)
Frame = +2
Query: 431 WWNQIQSAKWW 463
WW+ ++ WW
Sbjct: 1042 WWSSTTTSPWW 1052
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -2
Query: 375 LFYCEPGWHW 346
+F C PG HW
Sbjct: 1304 VFNCAPGLHW 1313
>AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase like
protein E1 protein.
Length = 139
Score = 21.8 bits (44), Expect = 6.8
Identities = 10/29 (34%), Positives = 11/29 (37%)
Frame = -1
Query: 463 PPFGGLYLIPPSSGGLWDGVITIPSASGP 377
PPFG L P W GV+ P
Sbjct: 9 PPFGVLRFKAPQPPENWTGVLDATKEGDP 37
>DQ855493-1|ABH88180.1| 127|Tribolium castaneum chemosensory
protein 7 protein.
Length = 127
Score = 21.4 bits (43), Expect = 9.0
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 660 GPL-SESRPYQRYRPDLPRNGCTR 592
GP SE R ++ PD +GCT+
Sbjct: 53 GPCTSEGRELKKTLPDALSSGCTK 76
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,189
Number of Sequences: 336
Number of extensions: 5195
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -