Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0526.Seq
         (826 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   2.1  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   2.8  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   3.7  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   4.9  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    24   6.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   6.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   6.5  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 647 NRGHINDIGQTFHETAAPDPALSHDRMP 564
           N G ++  G + H +++P P  SHD  P
Sbjct: 696 NNGDVHQGGDSNHTSSSPKPHDSHDDEP 723


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 408 PSHNPPEDGGIKYNPPNGGPADTN 479
           P+++PPE+G       +G   DTN
Sbjct: 240 PAYSPPEEGNTVSGGQDGNQMDTN 263


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +1

Query: 460 VARLIPTSLKWWKTGPSTAGRWPEXREAYLPRRSDGIR 573
           + ++ P+     +  P + GRWP  R     RRS   R
Sbjct: 247 IRKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTR 284


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = +3

Query: 309 QENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPPNGGPADTNVTK 488
           Q +NG + T + S +  + +      ADGI   P   PP    +    P G P  T + K
Sbjct: 751 QNSNGSSSTASSSVSTGMPSPSRSAFADGIGSPPPPPPPPPSSLS---PGGVPRPTVLQK 807

Query: 489 V 491
           +
Sbjct: 808 L 808


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 399 VITPSHNPPEDGGIKYNPPNGGPADTNVTKVV 494
           V+ PS    +DGG++ +     P D N  +++
Sbjct: 197 VVVPSIKVCDDGGVQSDGKATAPVDENKNEII 228


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 539  SRXSGHRPAVLGPVFHHFS 483
            S  + H PA++G ++H F+
Sbjct: 2384 SEYASHLPAIIGALYHKFA 2402


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 539  SRXSGHRPAVLGPVFHHFS 483
            S  + H PA++G ++H F+
Sbjct: 2385 SEYASHLPAIIGALYHKFA 2403


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 997,596
Number of Sequences: 2352
Number of extensions: 23600
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)