Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0526.Seq
(826 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23190.1 68414.m02897 phosphoglucomutase, cytoplasmic, putati... 58 5e-09
At1g70730.1 68414.m08153 phosphoglucomutase, cytoplasmic, putati... 57 2e-08
At5g51820.1 68418.m06425 phosphoglucomutase, chloroplast (PGM) (... 48 6e-06
At5g17530.2 68418.m02057 phosphoglucosamine mutase family protei... 40 0.003
At5g17530.1 68418.m02056 phosphoglucosamine mutase family protei... 40 0.003
At5g18070.1 68418.m02120 phosphoglucosamine mutase-related simil... 31 0.70
At1g33770.1 68414.m04174 protein kinase family protein contains ... 30 2.1
At1g28760.1 68414.m03537 expressed protein ; expression supporte... 29 3.7
At1g05470.1 68414.m00556 endonuclease/exonuclease/phosphatase fa... 29 3.7
At1g11090.1 68414.m01270 hydrolase, alpha/beta fold family prote... 28 8.7
>At1g23190.1 68414.m02897 phosphoglucomutase, cytoplasmic, putative
/ glucose phosphomutase, putative strong similarity to
SP|P93805 Phosphoglucomutase, cytoplasmic 2 (EC 5.4.2.2)
(Glucose phosphomutase 2) (PGM 2) {Zea mays}; contains
InterPro accession IPR006352: Phosphoglucosamine mutase
Length = 583
Score = 58.4 bits (135), Expect = 5e-09
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = +3
Query: 267 VLEVLAANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADG-IVITPSHNP---PEDG 434
++++ AANGV + N TPAVS I + G A G ++T SHNP ED
Sbjct: 74 IIKMAAANGVRRVWVGKNTLLSTPAVSAVIRERSGADGSKATGAFILTASHNPGGPTEDF 133
Query: 435 GIKYNPPNGGPADTNVTKVVEDRAK 509
GIKYN NGGPA ++T + + K
Sbjct: 134 GIKYNMENGGPAPESITDKIYENTK 158
>At1g70730.1 68414.m08153 phosphoglucomutase, cytoplasmic, putative
/ glucose phosphomutase, putative strong similarity to
SP|P93804 Phosphoglucomutase, cytoplasmic 1 (EC 5.4.2.2)
(Glucose phosphomutase 1) (PGM 1) {Zea mays}; contains
InterPro accession IPR006352: Phosphoglucosamine mutase
Length = 585
Score = 56.8 bits (131), Expect = 2e-08
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = +3
Query: 267 VLEVLAANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADG-IVITPSHNP---PEDG 434
++++ AANGV + N TPAVS I G A G ++T SHNP ED
Sbjct: 75 IVKMAAANGVRRVWVGQNSLLSTPAVSAIIRERVGADGSKATGAFILTASHNPGGPTEDF 134
Query: 435 GIKYNPPNGGPADTNVTKVVEDRAK 509
GIKYN NGGPA ++T + + K
Sbjct: 135 GIKYNMENGGPAPESITDKIYENTK 159
>At5g51820.1 68418.m06425 phosphoglucomutase, chloroplast (PGM)
(PGMP) / glucose phosphomutase identical to SP|Q9SCY0
Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2)
(Glucose phosphomutase) (PGM) {Arabidopsis thaliana}
Length = 623
Score = 48.4 bits (110), Expect = 6e-06
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +3
Query: 267 VLEVLAANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNP--PE-DGG 437
++++ A NGV I+ G TPAVS A++ K G G +++ SHNP PE D G
Sbjct: 138 IIKIAAGNGVGQILVGKEGILSTPAVS-AVIRKRKANG----GFIMSASHNPGGPEYDWG 192
Query: 438 IKYNPPNGGPADTNVT 485
IK+N +G PA +T
Sbjct: 193 IKFNYSSGQPAPETIT 208
>At5g17530.2 68418.m02057 phosphoglucosamine mutase family protein
low similarity to phosphoglucomutase/phosphomannomutase
[Sphingomonas paucimobilis] GI:6103619; contains
InterPro accession IPR006352: Phosphoglucosamine mutase
Length = 581
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +3
Query: 249 RTAFISVLEVLAANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADG-IVITPSHNPP 425
+T +V L +G+DV+ G TPA+ N+ L ++ ADG I+IT SH P
Sbjct: 121 QTLLEAVSRGLGVSGLDVV---QFGLASTPAMFNSTLTEDESFLCPADGAIMITASHLPY 177
Query: 426 EDGGIKYNPPNGGPADTNVTKVVEDRA 506
G K+ +GG ++ ++E A
Sbjct: 178 NRNGFKFFTSDGGLGKVDIKNILERAA 204
>At5g17530.1 68418.m02056 phosphoglucosamine mutase family protein
low similarity to phosphoglucomutase/phosphomannomutase
[Sphingomonas paucimobilis] GI:6103619; contains
InterPro accession IPR006352: Phosphoglucosamine mutase
Length = 581
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +3
Query: 249 RTAFISVLEVLAANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADG-IVITPSHNPP 425
+T +V L +G+DV+ G TPA+ N+ L ++ ADG I+IT SH P
Sbjct: 121 QTLLEAVSRGLGVSGLDVV---QFGLASTPAMFNSTLTEDESFLCPADGAIMITASHLPY 177
Query: 426 EDGGIKYNPPNGGPADTNVTKVVEDRA 506
G K+ +GG ++ ++E A
Sbjct: 178 NRNGFKFFTSDGGLGKVDIKNILERAA 204
>At5g18070.1 68418.m02120 phosphoglucosamine mutase-related similar
to SP|Q9P4V2 Phosphoacetylglucosamine mutase (EC
5.4.2.3) (PAGM) (Acetylglucosamine phosphomutase)
(N-acetylglucosamine-phosphate mutase) {Candida
albicans}; contains Pfam profiles PF00408:
Phosphoglucomutase/phosphomannomutase C-terminal domain,
PF02878: Phosphoglucomutase/phosphomannomutase
alpha/beta/alpha domain I
Length = 556
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 372 KGGPLADGIVITPSHNPPEDGGIKYNPPNG 461
K G G++IT SHN D GIK + P+G
Sbjct: 55 KLGSATVGLMITASHNKVSDNGIKVSDPSG 84
>At1g33770.1 68414.m04174 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 614
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 430 MVESNTIRQMVARLIPTSLKWWKTGPSTAGRWPEXREAYLPRRSDGIRSCERAGSG 597
++ SN R A LI +W T S AG E + ++PRR+D ++ G G
Sbjct: 100 LIISNVPRSAEAELIAAGWPYWLT--SVAG---EAIKGWVPRRADSFEKLDKIGQG 150
>At1g28760.1 68414.m03537 expressed protein ; expression supported
by MPSS
Length = 476
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 445 YLIPPSSGGLWDGVITIPSASGPP 374
+L P GGLW ++PS SG P
Sbjct: 350 FLSRPGGGGLWKSAKSVPSYSGSP 373
>At1g05470.1 68414.m00556 endonuclease/exonuclease/phosphatase
family protein simlar to inositol polyphosphate
5-phosphatase I (GI:10444261) and II (GI:10444263)
[Arabidopsis thaliana]; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 585
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = -3
Query: 683 SGSTPQRQARFLNRGHINDIGQTFHETAAPDPALSHDRMPSLRRGRYASRXSGHRPAVLG 504
SGST Q+ + F +R T+++ + P P L R R ++ R S P+ G
Sbjct: 158 SGSTRQKNSTFFHRRSFQTPSSTWNDPSIPQPGLDR-RFSVCDRVFFSHRPSDFDPSFRG 216
Query: 503 PVFHH 489
H
Sbjct: 217 SSSSH 221
>At1g11090.1 68414.m01270 hydrolase, alpha/beta fold family protein
similar to monoglyceride lipase from [Homo sapiens]
GI:14594904, [Mus musculus] GI:2632162; contains Pfam
profile PF00561: hydrolase, alpha/beta fold family
Length = 324
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 686 PSGSTPQRQARFLNRGHINDIGQTFHET 603
PS S+P R F+ G+ ND+ TF T
Sbjct: 49 PSSSSPPRGLIFMVHGYGNDVSWTFQST 76
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,340,629
Number of Sequences: 28952
Number of extensions: 482298
Number of successful extensions: 1260
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1892353600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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