Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0525.Seq
         (614 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060986-1|AAL28534.1|  215|Drosophila melanogaster GM14292p pro...    52   8e-07
AE014298-642|AAF45957.1|  215|Drosophila melanogaster CG11444-PA...    52   8e-07
BT024370-1|ABC86432.1|  189|Drosophila melanogaster IP07252p pro...    46   5e-05
AE014134-1632|AAF52770.1|  189|Drosophila melanogaster CG4438-PA...    46   5e-05
BT016134-1|AAV37019.1|  568|Drosophila melanogaster GH11784p pro...    28   8.7  
AE014297-2463|AAF55511.1|  568|Drosophila melanogaster CG7183-PA...    28   8.7  

>AY060986-1|AAL28534.1|  215|Drosophila melanogaster GM14292p
           protein.
          Length = 215

 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -3

Query: 486 MPRGKFTNHKGRNRKFTSPEELEEQRKHDEQK 391
           MPRGKF NHKGR+R FTSPEEL+++ + D  +
Sbjct: 1   MPRGKFVNHKGRSRHFTSPEELQQESEEDSDQ 32



 Score = 28.7 bits (61), Expect = 6.6
 Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 7/64 (10%)
 Frame = -2

Query: 253 EVENPNRV-------VXXXXXXXXXXXLGDVEKPQLSXXXXXXXXXXXXXXAYQKLHAEG 95
           E+ENPNRV       +            G   KP+LS               Y+KLHA G
Sbjct: 113 EIENPNRVTKKATQKLSAIKLDDGPAGAGGNPKPELSRREREQIEKQRARQRYEKLHAAG 172

Query: 94  KTEQ 83
           KT +
Sbjct: 173 KTTE 176


>AE014298-642|AAF45957.1|  215|Drosophila melanogaster CG11444-PA
           protein.
          Length = 215

 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -3

Query: 486 MPRGKFTNHKGRNRKFTSPEELEEQRKHDEQK 391
           MPRGKF NHKGR+R FTSPEEL+++ + D  +
Sbjct: 1   MPRGKFVNHKGRSRHFTSPEELQQESEEDSDQ 32



 Score = 28.7 bits (61), Expect = 6.6
 Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 7/64 (10%)
 Frame = -2

Query: 253 EVENPNRV-------VXXXXXXXXXXXLGDVEKPQLSXXXXXXXXXXXXXXAYQKLHAEG 95
           E+ENPNRV       +            G   KP+LS               Y+KLHA G
Sbjct: 113 EIENPNRVTKKATQKLSAIKLDDGPAGAGGNPKPELSRREREQIEKQRARQRYEKLHAAG 172

Query: 94  KTEQ 83
           KT +
Sbjct: 173 KTTE 176


>BT024370-1|ABC86432.1|  189|Drosophila melanogaster IP07252p
           protein.
          Length = 189

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = -3

Query: 486 MPRGKFTNHKGRNRKFTSPEELEEQRKHD 400
           MPRGKF ++KGR R+FTSPEEL ++ + D
Sbjct: 1   MPRGKFLSYKGRTRQFTSPEELRQESEDD 29


>AE014134-1632|AAF52770.1|  189|Drosophila melanogaster CG4438-PA
           protein.
          Length = 189

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = -3

Query: 486 MPRGKFTNHKGRNRKFTSPEELEEQRKHD 400
           MPRGKF ++KGR R+FTSPEEL ++ + D
Sbjct: 1   MPRGKFLSYKGRTRQFTSPEELRQESEDD 29


>BT016134-1|AAV37019.1|  568|Drosophila melanogaster GH11784p
           protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 9/51 (17%)
 Frame = -3

Query: 495 NHKMPRGKFTNHKGRNRKFTSP--------EELEEQRKHDEQKKKW-RKEQ 370
           N K  R   +NH   +  F  P        E L    KHDEQ+  W RKEQ
Sbjct: 201 NTKGSRELNSNHNSDDESFIGPRPTESVFSEALSTMTKHDEQRMNWERKEQ 251


>AE014297-2463|AAF55511.1|  568|Drosophila melanogaster CG7183-PA
           protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 9/51 (17%)
 Frame = -3

Query: 495 NHKMPRGKFTNHKGRNRKFTSP--------EELEEQRKHDEQKKKW-RKEQ 370
           N K  R   +NH   +  F  P        E L    KHDEQ+  W RKEQ
Sbjct: 201 NTKGSRELNSNHNSDDESFIGPRPTESVFSEALSTMTKHDEQRMNWERKEQ 251


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,650,163
Number of Sequences: 53049
Number of extensions: 215298
Number of successful extensions: 735
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)