Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0519.Seq
(880 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P43753 Cluster: Formate acetyltransferase; n=271; cellu... 192 1e-47
UniRef50_Q8FJC0 Cluster: Putative uncharacterized protein; n=1; ... 150 5e-35
UniRef50_A7MET3 Cluster: Putative uncharacterized protein; n=1; ... 146 5e-34
UniRef50_Q8G5Q3 Cluster: Formate acetyltransferase; n=5; Actinob... 127 4e-28
UniRef50_Q59934 Cluster: Formate acetyltransferase; n=55; Bacill... 116 1e-24
UniRef50_A4E923 Cluster: Putative uncharacterized protein; n=1; ... 67 6e-10
UniRef50_Q7NEY2 Cluster: Glr3745 protein; n=1; Gloeobacter viola... 59 1e-07
UniRef50_O06962 Cluster: Hypothetical pyruvate formate-lyase; n=... 46 0.001
UniRef50_Q18AX8 Cluster: Glycerol dehydratase; n=5; Clostridiace... 45 0.003
UniRef50_A6TKL5 Cluster: Pyruvate formate-lyase; n=1; Alkaliphil... 37 0.59
UniRef50_A7H9W3 Cluster: Putative transposase; n=1; Anaeromyxoba... 37 0.78
UniRef50_Q896R2 Cluster: Formate acetyltransferase 2; n=5; Bacte... 36 1.4
UniRef50_Q3ZZ25 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_Q1D0L6 Cluster: Putative uncharacterized protein; n=1; ... 35 3.1
UniRef50_Q1FMS4 Cluster: Pyruvate formate-lyase; n=7; Bacteria|R... 34 4.1
UniRef50_A6VVJ2 Cluster: Electron transport complex, RnfABCDGE t... 34 5.5
UniRef50_Q8CAH2 Cluster: Adult male hypothalamus cDNA, RIKEN ful... 33 7.2
UniRef50_A6LQ73 Cluster: Pyruvate formate-lyase; n=1; Clostridiu... 33 7.2
UniRef50_Q4RTJ3 Cluster: Chromosome 2 SCAF14997, whole genome sh... 33 9.6
UniRef50_A5ZSK3 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_Q7PRB6 Cluster: ENSANGP00000015421; n=2; Culicidae|Rep:... 33 9.6
>UniRef50_P43753 Cluster: Formate acetyltransferase; n=271; cellular
organisms|Rep: Formate acetyltransferase - Haemophilus
influenzae
Length = 770
Score = 192 bits (467), Expect = 1e-47
Identities = 109/203 (53%), Positives = 136/203 (66%), Gaps = 1/203 (0%)
Frame = -3
Query: 860 LKDKLAQXNSXARLNLENGVNLGTXYPXCPKXS*TAPRSGSR*KKMAAKYGYDISGPATN 681
+KDK AQ +S + +LE+GVNL + + R+ + K+MAA YGYDIS PATN
Sbjct: 194 MKDKYAQFSSLQK-DLEDGVNLEATIRLREEIA-EQHRALGQLKQMAASYGYDISNPATN 251
Query: 680 AQEAIQWNLLR-LPGCC*VSERCCNVLRSYLHLPGCVHRT*PESWQDHRTRSAGNG*PLV 504
AQEAIQW L + + R+ + + R ++ + T + LV
Sbjct: 252 AQEAIQWMYFAYLAAIKSQNGAAMSFGRTATFIDVYIERD-LKAGKITETEAQELVDHLV 310
Query: 503 MKLRMVRFLRTPEYDELFSGDPIWATESIGGMGLDGRTLVTKNSFRFLNTLYTMGPSPEP 324
MKLRMVRFLRTPEYD+LFSGDP+WATE+I GMGLDGRTLVTKN+FR L+TLY MG SPEP
Sbjct: 311 MKLRMVRFLRTPEYDQLFSGDPMWATETIAGMGLDGRTLVTKNTFRILHTLYNMGTSPEP 370
Query: 323 NMTILWSEKLPLNFKKFAAKVSI 255
N+TILWSE+LP NFK+F AKVSI
Sbjct: 371 NLTILWSEQLPENFKRFCAKVSI 393
Score = 157 bits (381), Expect = 3e-37
Identities = 71/83 (85%), Positives = 78/83 (93%)
Frame = -2
Query: 252 TSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGGVDEK 73
TSS+QYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKT+LYAINGG+DEK
Sbjct: 395 TSSVQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTLLYAINGGIDEK 454
Query: 72 LKMQVGPKSEPIKGDVLNYDEVM 4
L MQVGPK+ PI +VL++D VM
Sbjct: 455 LGMQVGPKTAPITDEVLDFDTVM 477
Score = 101 bits (242), Expect = 2e-20
Identities = 56/97 (57%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Frame = -1
Query: 796 LEQXIRXARRXPEXHRALGQDERKWLRNTATTSLVRLPT-LRKLSSGTYFGYLAAVKSQN 620
LE IR E HRALGQ K + + + T ++ YF YLAA+KSQN
Sbjct: 214 LEATIRLREEIAEQHRALGQ--LKQMAASYGYDISNPATNAQEAIQWMYFAYLAAIKSQN 271
Query: 619 GAAMSFGRTSTFLDVYIERDLKAGKITEQEAQEMVDH 509
GAAMSFGRT+TF+DVYIERDLKAGKITE EAQE+VDH
Sbjct: 272 GAAMSFGRTATFIDVYIERDLKAGKITETEAQELVDH 308
>UniRef50_Q8FJC0 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli O6|Rep: Putative uncharacterized
protein - Escherichia coli O6
Length = 404
Score = 150 bits (363), Expect = 5e-35
Identities = 98/198 (49%), Positives = 116/198 (58%)
Frame = +3
Query: 264 FSGEFLEVQRQFFRPQNGHVRFRRRTHGVQGVQETEAVFGNQGTTVEAHTTDRFGCPDRV 443
FSG F + + F +G + +R +ETEAVFGNQGTTVEAHTTDRFGCPDRV
Sbjct: 30 FSGSFSDHRMVMFGSGDGPMVYRV-------FRETEAVFGNQGTTVEAHTTDRFGCPDRV 82
Query: 444 AREQFIVFRSTQEANHTQFHDQWSTISCASCSVILPAFRSRSMYTSRKVEVRPKDIAAPF 623
AREQFIVFRSTQEANHTQFHDQ L +F+ ++ + +
Sbjct: 83 AREQFIVFRSTQEANHTQFHDQVVNHFLRFLFGDLASFQVTFDVHIQEGGGTTEGHCSTV 142
Query: 624 *DLTAAR*PK*VPLDSFLSVGSRTRDVVAVFRSHFLSS*PRARCXSGXLRAXRIXCSKVY 803
L +++ + PLDSFLSVGSRTRDVVAVFRSHF A S A +VY
Sbjct: 143 LRLNSSQVAEVSPLDSFLSVGSRTRDVVAVFRSHFFHLTQSAVLFSDFF-AQTDSLFQVY 201
Query: 804 AVFQIQPCXRIXLCQFVF 857
AVFQI R LC+FVF
Sbjct: 202 AVFQIS-LQRGELCKFVF 218
Score = 116 bits (278), Expect = 1e-24
Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
Frame = +2
Query: 509 VVNHFLRFLFGDLASFQVTFDVHIQEGGGTTEGHCSTVLRLNSSQVAEVSSTG*LPERW* 688
VVNHFLRFLFGDLASFQVTFDVHIQEGGGTTEGHCSTVLRLNSSQVAEVS L
Sbjct: 105 VVNHFLRFLFGDLASFQVTFDVHIQEGGGTTEGHCSTVLRLNSSQVAEVSP---LDSFLS 161
Query: 689 PDQRCRSRIS--QPFSFILTQSAVXFRXSSGXTDXLFQ 796
R R ++ + F LTQSAV F TD LFQ
Sbjct: 162 VGSRTRDVVAVFRSHFFHLTQSAVLFSDFFAQTDSLFQ 199
Score = 80.6 bits (190), Expect = 5e-14
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 256 MDTLAANFLKFSGSFSDHRMVMFGSGDGPMVYRVFRK 366
MDTLAANFLKFSGSFSDHRMVMFGSGDGPMVYRVFR+
Sbjct: 20 MDTLAANFLKFSGSFSDHRMVMFGSGDGPMVYRVFRE 56
Score = 39.5 bits (88), Expect = 0.11
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 200 LLKSGRIRSSFSYCREEV 253
+LKSGRIRSSFSYCREEV
Sbjct: 1 MLKSGRIRSSFSYCREEV 18
>UniRef50_A7MET3 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 783
Score = 146 bits (355), Expect = 5e-34
Identities = 91/201 (45%), Positives = 107/201 (53%)
Frame = +3
Query: 255 DGHFSGEFLEVQRQFFRPQNGHVRFRRRTHGVQGVQETEAVFGNQGTTVEAHTTDRFGCP 434
DG+F EF EVQRQFF PQN VR RRR HGV+GVQE EAVFG Q T V AHTT+ FG P
Sbjct: 399 DGNFRREFFEVQRQFFGPQNRDVRLRRRPHGVEGVQEAEAVFGYQRTAVNAHTTNGFGRP 458
Query: 435 DRVAREQFIVFRSTQEANHTQFHDQWSTISCASCSVILPAFRSRSMYTSRKVEVRPKDIA 614
DRVA EQ I+FR TQEA+HTQFH Q F+ ++ K
Sbjct: 459 DRVAGEQLIIFRCTQEAHHTQFHHQVVDQFLGFLLGEFACFQVAFDVHVKEGGDAAKGHR 518
Query: 615 APF*DLTAAR*PK*VPLDSFLSVGSRTRDVVAVFRSHFLSS*PRARCXSGXLRAXRIXCS 794
++ + PL FLSVG RT D+ A+FR H RA S
Sbjct: 519 GTVLGFHRSQVAEVSPLHGFLSVGRRTGDITAIFRCHLFDLAQRAVLFSNFFTQTDSR-F 577
Query: 795 KVYAVFQIQPCXRIXLCQFVF 857
+VYA+FQ+ R LC FVF
Sbjct: 578 QVYAIFQVL-LQRDKLCIFVF 597
Score = 141 bits (341), Expect = 2e-32
Identities = 66/99 (66%), Positives = 75/99 (75%)
Frame = +1
Query: 4 HHFIIVQDIAFDRFRLRTNLHFQFFVNAAVDCVQHGFRQVCTRTEELHLFTNDHRAYAAS 183
H+F+ +Q IAFDRFR R LHFQFF+NAAVD VQHGFR+V TEELHL TN HRAYAA
Sbjct: 315 HNFVEIQQIAFDRFRFRAYLHFQFFINAAVDSVQHGFREVSASTEELHLLTNHHRAYAAC 374
Query: 184 NSVVIVVEVRTHQVIVLILQRRGVMDTLAANFLKFSGSF 300
+SVV+VVEVRTHQVIVL+LQRRGV F + F
Sbjct: 375 DSVVVVVEVRTHQVIVLVLQRRGVDGNFRREFFEVQRQF 413
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = +2
Query: 509 VVNHFLRFLFGDLASFQVTFDVHIQEGGGTTEGHCSTVLRLNSSQVAEVS 658
VV+ FL FL G+ A FQV FDVH++EGG +GH TVL + SQVAEVS
Sbjct: 484 VVDQFLGFLLGEFACFQVAFDVHVKEGGDAAKGHRGTVLGFHRSQVAEVS 533
>UniRef50_Q8G5Q3 Cluster: Formate acetyltransferase; n=5;
Actinobacteridae|Rep: Formate acetyltransferase -
Bifidobacterium longum
Length = 804
Score = 127 bits (306), Expect = 4e-28
Identities = 69/156 (44%), Positives = 89/156 (57%), Gaps = 2/156 (1%)
Frame = -3
Query: 716 KYGYDISGPATNAQEAIQWNLLRLPGCC*VSERCCNVLRSYLHLPGCVHRT*PESWQDHR 537
+YG D+S PA AQEA+QW + + C ++ +
Sbjct: 263 EYGLDLSRPAQTAQEAVQWTYMGYLASIKSQDGAAMSFGRNSAFLDCYIERDLQAGKITE 322
Query: 536 TRSAGNG*PLVMKLRMVRFLRTPEYDELFSGDPIWATESIGGMGLDGRTLVTKNSFRFLN 357
T + +VMKLR+VRFLRT +YD +FSGDP WAT S G G DGR++VTK SFR LN
Sbjct: 323 TDAQELIDNIVMKLRIVRFLRTKDYDSIFSGDPYWATWSDAGFGDDGRSMVTKTSFRLLN 382
Query: 356 TLYT--MGPSPEPNMTILWSEKLPLNFKKFAAKVSI 255
TL +GP PEPN+TI W KLP +K+F AK+SI
Sbjct: 383 TLTLEHLGPGPEPNITIFWDPKLPEAYKRFCAKISI 418
Score = 88.6 bits (210), Expect = 2e-16
Identities = 50/87 (57%), Positives = 60/87 (68%), Gaps = 5/87 (5%)
Frame = -2
Query: 252 TSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGGVDEK 73
TS++QYE+D +R + DD AIACCVSPM VGKQMQFF AR N AK +LYAINGG DE
Sbjct: 420 TSAIQYESDKEIRSHWG-DDAAIACCVSPMRVGKQMQFFAARVNSAKALLYAINGGRDEM 478
Query: 72 LKMQVGPKS--EPIKGD---VLNYDEV 7
MQV K EPI + L+Y++V
Sbjct: 479 TGMQVIDKGVIEPITPEADGTLDYEKV 505
Score = 84.6 bits (200), Expect = 3e-15
Identities = 38/58 (65%), Positives = 48/58 (82%)
Frame = -1
Query: 682 TLRKLSSGTYFGYLAAVKSQNGAAMSFGRTSTFLDVYIERDLKAGKITEQEAQEMVDH 509
T ++ TY GYLA++KSQ+GAAMSFGR S FLD YIERDL+AGKITE +AQE++D+
Sbjct: 274 TAQEAVQWTYMGYLASIKSQDGAAMSFGRNSAFLDCYIERDLQAGKITETDAQELIDN 331
>UniRef50_Q59934 Cluster: Formate acetyltransferase; n=55;
Bacilli|Rep: Formate acetyltransferase - Streptococcus
mutans
Length = 775
Score = 116 bits (278), Expect = 1e-24
Identities = 64/154 (41%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Frame = -3
Query: 713 YGYDISGPATNAQEAIQW-NLLRLPGCC*VSERCCNVLRSYLHLPGCVHRT*PE-SWQDH 540
YG D+ PA N +EAIQW N+ + C ++ ++ R + L R ++ +
Sbjct: 235 YGLDVRKPAMNVKEAIQWINIAFMAVCRVINGAATSLGRVPIVLDIFAERDLARGTFTES 294
Query: 539 RTRSAGNG*PLVMKLRMVRFLRTPEYDELFSGDPIWATESIGGMGLDGRTLVTKNSFRFL 360
+ + VMKLR V+F RT YDEL+SGDP + T S+ GMG DGR VTK +RFL
Sbjct: 295 EIQEFVDD--FVMKLRTVKFARTKAYDELYSGDPTFITTSMAGMGADGRHRVTKMDYRFL 352
Query: 359 NTLYTMGPSPEPNMTILWSEKLPLNFKKFAAKVS 258
NTL +G +PEPN+T+LWS KLP F+ + +S
Sbjct: 353 NTLDNIGNAPEPNLTVLWSSKLPYPFRHYCMSMS 386
Score = 57.6 bits (133), Expect = 4e-07
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Frame = -2
Query: 258 HHTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQ-----MQFFGARANLAKTMLYAI 94
H SS+QYE M + + I+CCVSP+ + +Q+FGAR N+ K +L +
Sbjct: 387 HKHSSIQYEGVTTMAKEGYGEMSCISCCVSPLDPENEDRRHNLQYFGARVNVLKALLTGL 446
Query: 93 NGGVDEKLKMQVGPKSEPIKGDVLNYDEV 7
NGG D+ K EPI+ +VL+++ V
Sbjct: 447 NGGYDDVHKDYKVFDVEPIRDEVLDFETV 475
Score = 47.6 bits (108), Expect = 4e-04
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = -1
Query: 646 YLAAVKSQNGAAMSFGRTSTFLDVYIERDLKAGKITEQEAQEMVD 512
++A + NGAA S GR LD++ ERDL G TE E QE VD
Sbjct: 257 FMAVCRVINGAATSLGRVPIVLDIFAERDLARGTFTESEIQEFVD 301
>UniRef50_A4E923 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 652
Score = 66.9 bits (156), Expect = 6e-10
Identities = 39/115 (33%), Positives = 59/115 (51%)
Frame = +1
Query: 4 HHFIIVQDIAFDRFRLRTNLHFQFFVNAAVDCVQHGFRQVCTRTEELHLFTNDHRAYAAS 183
H+ ++++ IA D L +L VN AV+CVQ QV EELHL + H +AA
Sbjct: 167 HNVVVIERIALDGAILGADLLLGDLVNTAVECVQQALGQVGASAEELHLLADAHGGHAAG 226
Query: 184 NSVVIVVEVRTHQVIVLILQRRGVMDTLAANFLKFSGSFSDHRMVMFGSGDGPMV 348
++VV+ + + H+V+VL+L R +L A L+ G + G G G V
Sbjct: 227 DAVVVAM-IDAHEVVVLVLDRGASDRSLGAELLEVLGQTGRPQNGHVGLGAGAHV 280
Score = 66.5 bits (155), Expect = 8e-10
Identities = 35/85 (41%), Positives = 44/85 (51%)
Frame = +3
Query: 255 DGHFSGEFLEVQRQFFRPQNGHVRFRRRTHGVQGVQETEAVFGNQGTTVEAHTTDRFGCP 434
D E LEV Q RPQNGHV H ++ VQ A GN+ T V+ H D G P
Sbjct: 250 DRSLGAELLEVLGQTGRPQNGHVGLGAGAHVLERVQVAVAHLGNERTAVDTHAADGLGDP 309
Query: 435 DRVAREQFIVFRSTQEANHTQFHDQ 509
RVA EQ +V T + +H + HD+
Sbjct: 310 LRVAGEQGLVLGGTGKLDHAKLHDE 334
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 509 VVNHFLRFLFGDLASFQVTFDVHIQEGGGTTEGHCSTVLRLNSSQVAEV 655
V++ L L G+ +V V + E GGT +GH VL L+ S+V EV
Sbjct: 335 VIHELLDLLLGEGTVGKVALSVDVDERGGTADGHSGAVLLLDGSEVGEV 383
>UniRef50_Q7NEY2 Cluster: Glr3745 protein; n=1; Gloeobacter
violaceus|Rep: Glr3745 protein - Gloeobacter violaceus
Length = 460
Score = 59.3 bits (137), Expect = 1e-07
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = -3
Query: 413 GMGLDGRTLVTKNSFRFLNTLYTMGPSPEPNMTILWSEKLPLNFKKFAAKVSI 255
G+ +GR LVT+ FRF+NT Y +GP+ EP++ +LWS L F++F +V+I
Sbjct: 302 GVDPEGRPLVTRTDFRFVNTCYNLGPAAEPHLLVLWSAALSGAFRRFCGEVTI 354
Score = 43.6 bits (98), Expect = 0.007
Identities = 23/57 (40%), Positives = 29/57 (50%)
Frame = -1
Query: 682 TLRKLSSGTYFGYLAAVKSQNGAAMSFGRTSTFLDVYIERDLKAGKITEQEAQEMVD 512
T ++ TY LA G S TF DVY +RDL G + E+EAQE+VD
Sbjct: 223 TAQQAIQWTYLALLATRDPLFGRRRSVTGLDTFFDVYFQRDLARGLLVEEEAQELVD 279
Score = 34.3 bits (75), Expect = 4.1
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -3
Query: 725 MAAKYGYDISGPATNAQEAIQWNLLRL 645
+A YG DI PA AQ+AIQW L L
Sbjct: 209 LAGCYGLDIGRPAATAQQAIQWTYLAL 235
>UniRef50_O06962 Cluster: Hypothetical pyruvate formate-lyase; n=1;
Salmonella typhimurium|Rep: Hypothetical pyruvate
formate-lyase - Salmonella typhimurium
Length = 276
Score = 46.4 bits (105), Expect = 0.001
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -3
Query: 731 KKMAAKYGYDISGPATNAQEAIQW 660
++MAAKYGYDIS PA NAQEA+QW
Sbjct: 238 QEMAAKYGYDISRPARNAQEAVQW 261
>UniRef50_Q18AX8 Cluster: Glycerol dehydratase; n=5;
Clostridiaceae|Rep: Glycerol dehydratase - Clostridium
difficile (strain 630)
Length = 790
Score = 44.8 bits (101), Expect = 0.003
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = -1
Query: 655 YFGYLAAVKSQNGAAMSFGRTSTFLDVYIERDLKAGKITEQEAQEMVD 512
+F L + S+N A++ GR ++ Y E D + GKITE EAQE+++
Sbjct: 265 WFVQLGGILSENPLALNLGRFDQYMYPYYENDAREGKITESEAQELIE 312
>UniRef50_A6TKL5 Cluster: Pyruvate formate-lyase; n=1; Alkaliphilus
metalliredigens QYMF|Rep: Pyruvate formate-lyase -
Alkaliphilus metalliredigens QYMF
Length = 806
Score = 37.1 bits (82), Expect = 0.59
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = -2
Query: 195 DYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGGVDEKLKMQVGPKSEPIKGDVLNY 16
DY I CV G Q + G N+A+ + A+N GVD Q+GP++ + D+ ++
Sbjct: 441 DYRIVGCVELAPRGFQGRVNGGFLNVARVVDLALNNGVDRLTNEQIGPQTGAPE-DLKDF 499
Query: 15 DEVM 4
D+V+
Sbjct: 500 DDVL 503
>UniRef50_A7H9W3 Cluster: Putative transposase; n=1;
Anaeromyxobacter sp. Fw109-5|Rep: Putative transposase -
Anaeromyxobacter sp. Fw109-5
Length = 482
Score = 36.7 bits (81), Expect = 0.78
Identities = 27/73 (36%), Positives = 35/73 (47%)
Frame = -2
Query: 738 KMKENGCEIRLRHLWSGYQRSGSYPVELTSATWLLLSLRTVLQCPSVVPPPSWMCTSNVT 559
K + GC I R L SG + V L S W LL+LRT+ + S P + + + V
Sbjct: 354 KSLKTGCSIEKRQLESGAALLNALAV-LASVAWRLLALRTLARDASDAPAATALTSVQV- 411
Query: 558 *KLARSPNKKRRK 520
K R KKRRK
Sbjct: 412 -KCLRFAYKKRRK 423
>UniRef50_Q896R2 Cluster: Formate acetyltransferase 2; n=5;
Bacteria|Rep: Formate acetyltransferase 2 - Clostridium
tetani
Length = 803
Score = 35.9 bits (79), Expect = 1.4
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -2
Query: 195 DYAIACCVSPMIVGKQMQFFGAR-ANLAKTMLYAINGG-VDEKLKMQVGPKSEPIKGDVL 22
DYAI CV P GK ++ A N+AK + IN G VD K Q+GPK+
Sbjct: 432 DYAIVGCVEPQKPGKTDGWYDAAFFNMAKVLEMTINNGKVDGK---QIGPKTGEFT-SFS 487
Query: 21 NYDEVME 1
N DE +E
Sbjct: 488 NIDEFIE 494
>UniRef50_Q3ZZ25 Cluster: Putative uncharacterized protein; n=1;
Dehalococcoides sp. CBDB1|Rep: Putative uncharacterized
protein - Dehalococcoides sp. (strain CBDB1)
Length = 251
Score = 35.1 bits (77), Expect = 2.4
Identities = 24/100 (24%), Positives = 43/100 (43%)
Frame = -1
Query: 688 LPTLRKLSSGTYFGYLAAVKSQNGAAMSFGRTSTFLDVYIERDLKAGKITEQEAQEMVDH 509
LP R G + + N + FG T+ +++++ +R L+ I Q+ E+ +
Sbjct: 36 LPNYRTAVHGLTKADIKKIFLVNDDSDYFGITNQWVELWDKRKLQLSTIVIQKINEVTEK 95
Query: 508 WS*NCVWFASCVLRNTMNCSLATRSGQPNLSVVWASTVVP 389
W C W VL C+ A +SG +W ++P
Sbjct: 96 WGLRCFWGEGFVL----TCAEAAKSG------IWLGIILP 125
>UniRef50_Q1D0L6 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 146
Score = 34.7 bits (76), Expect = 3.1
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +1
Query: 112 FRQVCTRTEELHLFTNDHRAYAASNSVVIVVEVRTHQVIVLILQRRGVMDTLAANFLK-F 288
FR V ++LHL A + +VV V++V H+++ ++ RRG + T A ++ F
Sbjct: 15 FRHVFVSAQDLHL------AVVIAVAVVRVMQVTVHEIVHVVPVRRGRVATRGAVAVRGF 68
Query: 289 SGSFSDHRMVMFGSGDGPMVYRVFRKRKLFLVTRVR 396
G+ R + G V RVF +R L V RVR
Sbjct: 69 MGTTGMLRRALRG------VARVFGERALVRVVRVR 98
>UniRef50_Q1FMS4 Cluster: Pyruvate formate-lyase; n=7; Bacteria|Rep:
Pyruvate formate-lyase - Clostridium phytofermentans
ISDg
Length = 867
Score = 34.3 bits (75), Expect = 4.1
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = -1
Query: 622 NGAAMSFGRTSTFLDVYIERDLKAGKITEQEAQEMVD 512
+G ++S GR +L Y + D +AG+IT ++AQE++D
Sbjct: 281 SGHSISPGRFDQYLYSYYKADREAGRITGEQAQEIID 317
>UniRef50_A6VVJ2 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=2; Marinomonas|Rep: Electron
transport complex, RnfABCDGE type, C subunit -
Marinomonas sp. MWYL1
Length = 981
Score = 33.9 bits (74), Expect = 5.5
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 429 CPDRVAREQFIVFRSTQEANHTQFHDQWSTISCASCSVILPA 554
CP + +Q + F +QE + H+ + I C +CS + P+
Sbjct: 383 CPASLLPQQLLWFSKSQEFEKAEHHNLFDCIECGACSYVCPS 424
>UniRef50_Q8CAH2 Cluster: Adult male hypothalamus cDNA, RIKEN
full-length enriched library, clone:A230060L21
product:RIKEN cDNA 4931403I22; n=6; Eutheria|Rep: Adult
male hypothalamus cDNA, RIKEN full-length enriched
library, clone:A230060L21 product:RIKEN cDNA 4931403I22
- Mus musculus (Mouse)
Length = 316
Score = 33.5 bits (73), Expect = 7.2
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +3
Query: 207 SPDASGHRSHTAEKRCDGHFSGEFLEVQRQFFRPQNGHVRFRRRTHGVQGVQETEAVFGN 386
S +S SH K+ + S +R + RP +GH R+ T A F N
Sbjct: 39 SSSSSSSSSHKRHKKSKRNRSESSRSSKRHWSRPSSGHTDQSRKDDCYPVPTNTSASFLN 98
Query: 387 QGTTVE--AHTTDRFGCPDRVAREQ 455
Q VE DR CP+ +E+
Sbjct: 99 QKQEVEKLLEKQDRLQCPNAQVKEK 123
>UniRef50_A6LQ73 Cluster: Pyruvate formate-lyase; n=1; Clostridium
beijerinckii NCIMB 8052|Rep: Pyruvate formate-lyase -
Clostridium beijerinckii NCIMB 8052
Length = 784
Score = 33.5 bits (73), Expect = 7.2
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = -3
Query: 509 LVMKLRMVRFLRTPEYDELFSGDPIWATESIGGMGLDGRTLVTKNSFRFLNTLYTMGPSP 330
L +K + +LR + F+G PI +IGG + SF FL +G P
Sbjct: 306 LWLKFNEIVYLRNSHSAKFFAGFPIGFNIAIGGQDEKSNDFSNELSFLFLKAQEHLG-LP 364
Query: 329 EPNMTIL----WSEKLPLNFKKFAAKVSITP 249
+PN+++ SEKL K AK S P
Sbjct: 365 QPNLSVRLHKNTSEKLLKESIKVVAKGSGMP 395
>UniRef50_Q4RTJ3 Cluster: Chromosome 2 SCAF14997, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF14997, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 854
Score = 33.1 bits (72), Expect = 9.6
Identities = 28/115 (24%), Positives = 45/115 (39%)
Frame = +1
Query: 19 VQDIAFDRFRLRTNLHFQFFVNAAVDCVQHGFRQVCTRTEELHLFTNDHRAYAASNSVVI 198
+++ +R +R N H + AV V+H ++CT + HL T R A S+
Sbjct: 44 LENYGLERIEVRDNGHGIKAADTAVMAVRHFTSKICTHEDLGHLETYGFRG-EALGSICA 102
Query: 199 VVEVRTHQVIVLILQRRGVMDTLAANFLKFSGSFSDHRMVMFGSGDGPMVYRVFR 363
V EV V + + D L +G + G G V R+F+
Sbjct: 103 VAEV----TFVTVTTKTEEEDISTQYTLNLTGGIVSQKPSHLGQGTTVSVLRIFK 153
>UniRef50_A5ZSK3 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 745
Score = 33.1 bits (72), Expect = 9.6
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1
Query: 601 GRTSTFLDVYIERDLKAGKITEQEAQEMVD 512
G L Y ERDLK +IT EAQE++D
Sbjct: 250 GHLDRILISYYERDLKNNRITPDEAQELID 279
>UniRef50_Q7PRB6 Cluster: ENSANGP00000015421; n=2; Culicidae|Rep:
ENSANGP00000015421 - Anopheles gambiae str. PEST
Length = 245
Score = 33.1 bits (72), Expect = 9.6
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = -2
Query: 699 LW-SGYQRSGSYPVELTSATWLLLSLRTVLQCP---SVVPPPSWMC 574
LW SG++++ P L+ L + +L+CP V+ PPSW C
Sbjct: 142 LWNSGFEKNNLNPQSLSRFANCLQGIAGLLECPICLEVIRPPSWQC 187
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 950,739,082
Number of Sequences: 1657284
Number of extensions: 21248984
Number of successful extensions: 59047
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 56014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59010
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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