Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0519.Seq
         (880 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14...    27   1.00 
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    26   1.3  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    25   3.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   4.0  
AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    25   4.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   4.0  

>AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14A
           protein.
          Length = 365

 Score = 26.6 bits (56), Expect = 1.00
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 386 PGYDRRGPY-HR*IRLPRSGRQRTVH 460
           PGYD+ GPY H  I L R  R  T++
Sbjct: 211 PGYDKNGPYQHHDIALIRLDRDVTMN 236


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 399 VEAHTTDRFGCPDRVAREQ 455
           VE H T    CP+R+AR Q
Sbjct: 379 VEPHITGSLRCPNRIARRQ 397


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
 Frame = +3

Query: 222 GHRSHTAEKRCDGHFSGEFLEVQRQFFRPQNGHVRFRRRTHGVQGVQETEAVFGNQGTTV 401
           G+ + TA+     HF G  + + R   R + G  R  R  H +        ++GN     
Sbjct: 193 GYGNFTADAFTCLHFQGSAMLLHRLLERYRPGRPRATRYVHVLNAEIVLHDLWGNVDYW- 251

Query: 402 EAHTTDRFGCP--DRVAREQFIVFRSTQEANHTQFHDQWS 515
           EA  + RF  P  D   R +     S+  A+ T    +W+
Sbjct: 252 EARRSMRFAPPLVDVATRFRAEYLNSSDRADRTVRPARWT 291


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 822 AEFGKRRKPWNKXSVXPEEXLNXTALWV 739
           A FG+ RK WN  S+   +      LW+
Sbjct: 280 AVFGRERKVWNSASLIDVDRDGKDELWL 307


>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 49  LRTNLHFQFFVNAAVDCVQHGFRQVCTRTEELHLFTND 162
           L + +    F N  +   Q GFR   + T +LH  TN+
Sbjct: 19  LESRMALHTFNNNIIPKSQFGFRPSLSTTHQLHRVTNN 56


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 730 RKWLRNTATTSLVRLPTLRK 671
           RKW+++T    L+R P+L++
Sbjct: 573 RKWIKDTFEDKLIRQPSLQQ 592


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 997,863
Number of Sequences: 2352
Number of extensions: 23293
Number of successful extensions: 97
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)