Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0517.Seq
         (869 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    75   3e-12
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    75   3e-12
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    75   3e-12
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    74   4e-12
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:...    49   1e-04
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    49   2e-04
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba...    42   0.027
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ...    39   0.19 
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    37   0.58 
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp...    36   1.3  
UniRef50_Q9FZK7 Cluster: F17L21.7; n=10; core eudicotyledons|Rep...    33   7.1  
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    33   9.4  

>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 74.5 bits (175), Expect = 3e-12
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = +3

Query: 510 NPGVTQLNRLAAHPPFASWRNSEXARTXRPSQQLRT 617
           NPGVTQLNRLAAHPPFASWRNSE ART RPSQQLR+
Sbjct: 33  NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRS 68


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 74.5 bits (175), Expect = 3e-12
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = +3

Query: 510 NPGVTQLNRLAAHPPFASWRNSEXARTXRPSQQLRT 617
           NPGVTQLNRLAAHPPFASWRNSE ART RPSQQLR+
Sbjct: 37  NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRS 72


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 74.5 bits (175), Expect = 3e-12
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = +3

Query: 510 NPGVTQLNRLAAHPPFASWRNSEXARTXRPSQQLRT 617
           NPGVTQLNRLAAHPPFASWRNSE ART RPSQQLR+
Sbjct: 19  NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRS 54


>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 74.1 bits (174), Expect = 4e-12
 Identities = 33/35 (94%), Positives = 33/35 (94%)
 Frame = +3

Query: 510 NPGVTQLNRLAAHPPFASWRNSEXARTXRPSQQLR 614
           NPGVTQLNRLAAHPPFASWRNSE ART RPSQQLR
Sbjct: 79  NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 113


>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
           Beta-galactosidase - Yersinia pseudotuberculosis
          Length = 1066

 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 21/36 (58%), Positives = 26/36 (72%)
 Frame = +3

Query: 510 NPGVTQLNRLAAHPPFASWRNSEXARTXRPSQQLRT 617
           NP +TQ +RL AHPPF SWR+ E A+  RPS Q +T
Sbjct: 26  NPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQQQT 61


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 48.8 bits (111), Expect = 2e-04
 Identities = 29/47 (61%), Positives = 32/47 (68%), Gaps = 7/47 (14%)
 Frame = +1

Query: 508 ETLALPNLIALQHIPLSPAGVIA-----XRPXP--XALPNSCAPEWR 627
           +TLALPNLIALQHIPLSPAGVI+      RP     +L    APEWR
Sbjct: 16  KTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRSLKWRMAPEWR 62



 Score = 34.3 bits (75), Expect = 4.1
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = +2

Query: 476 HWPSFYNVVTGKPWRYP 526
           HWPSFYNVVTGK    P
Sbjct: 5   HWPSFYNVVTGKTLALP 21


>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
           Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
           pneumoniae
          Length = 1034

 Score = 41.5 bits (93), Expect = 0.027
 Identities = 19/35 (54%), Positives = 22/35 (62%)
 Frame = +3

Query: 510 NPGVTQLNRLAAHPPFASWRNSEXARTXRPSQQLR 614
           N  +T LNRL AHP FASWR+   AR   PS + R
Sbjct: 25  NQTITHLNRLPAHPVFASWRDELAARDNLPSSRRR 59


>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
           Enterobacter sakazakii ATCC BAA-894|Rep: Putative
           uncharacterized protein - Enterobacter sakazakii ATCC
           BAA-894
          Length = 1043

 Score = 38.7 bits (86), Expect = 0.19
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 510 NPGVTQLNRLAAHPPFASWRNSEXARTXRPS 602
           NP +T +NRL +H P   WR+++ AR   PS
Sbjct: 29  NPAITSVNRLPSHTPLHGWRDADRARRGEPS 59


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 37.1 bits (82), Expect = 0.58
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +2

Query: 425 RGGARYPIRPIVSRIT 472
           RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275


>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
           spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
           spumigena CCY 9414
          Length = 72

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = +3

Query: 564 WRNSEXARTXRPSQQLRT 617
           WRNSE ART RPSQQLR+
Sbjct: 47  WRNSEEARTDRPSQQLRS 64


>UniRef50_Q9FZK7 Cluster: F17L21.7; n=10; core eudicotyledons|Rep:
            F17L21.7 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 1534

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = -1

Query: 215  QFTERKIPEAASSTTMVADGGSTNMSDECLRSQNVSRAAIRVDTAPVAAATHALPPLADT 36
            QF E + P + S T  V++      S  C   Q  SR  I+  + P+  A  +LPPL+  
Sbjct: 836  QFVEDQFPFSISDTHSVSNSSPEEASPSC--HQPPSRIPIQSSSPPLVQAPSSLPPLSSD 893

Query: 35   NTR 27
            + R
Sbjct: 894  SHR 896


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 33.1 bits (72), Expect = 9.4
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -1

Query: 467 YDSL*GELGTGPPLE 423
           YDSL GELGTGPPLE
Sbjct: 278 YDSLYGELGTGPPLE 292


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,399,753
Number of Sequences: 1657284
Number of extensions: 12647253
Number of successful extensions: 26073
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 25305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26067
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)