Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0517.Seq
         (869 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117479-1|AAI17480.1|  169|Homo sapiens family with sequence si...    30   9.5  
BC112268-1|AAI12269.1|  169|Homo sapiens family with sequence si...    30   9.5  
AY325119-1|AAP92411.1|  169|Homo sapiens TAFA3.2 protein.              30   9.5  
AY325116-1|AAP92408.1|  133|Homo sapiens TAFA3 protein.                30   9.5  
AL603832-11|CAI14064.1|  169|Homo sapiens family with sequence s...    30   9.5  
AL603832-10|CAI14063.1|  133|Homo sapiens family with sequence s...    30   9.5  

>BC117479-1|AAI17480.1|  169|Homo sapiens family with sequence
           similarity 19 (chemokine (C-C motif)-like), member A3
           protein.
          Length = 169

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 97  IAALLTFWLRRHSSLIFVDPPSATIVVDDAASGILRSVNC 216
           + AL   WL  H +L  + PP+AT++V      ++ +  C
Sbjct: 15  LLALCLAWLWTHLTLAALQPPTATVLVQQGTCEVIAAHRC 54


>BC112268-1|AAI12269.1|  169|Homo sapiens family with sequence
           similarity 19 (chemokine (C-C motif)-like), member A3,
           iso protein.
          Length = 169

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 97  IAALLTFWLRRHSSLIFVDPPSATIVVDDAASGILRSVNC 216
           + AL   WL  H +L  + PP+AT++V      ++ +  C
Sbjct: 15  LLALCLAWLWTHLTLAALQPPTATVLVQQGTCEVIAAHRC 54


>AY325119-1|AAP92411.1|  169|Homo sapiens TAFA3.2 protein.
          Length = 169

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 97  IAALLTFWLRRHSSLIFVDPPSATIVVDDAASGILRSVNC 216
           + AL   WL  H +L  + PP+AT++V      ++ +  C
Sbjct: 15  LLALCLAWLWTHLTLAALQPPTATVLVQQGTCEVIAAHRC 54


>AY325116-1|AAP92408.1|  133|Homo sapiens TAFA3 protein.
          Length = 133

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 97  IAALLTFWLRRHSSLIFVDPPSATIVVDDAASGILRSVNC 216
           + AL   WL  H +L  + PP+AT++V      ++ +  C
Sbjct: 15  LLALCLAWLWTHLTLAALQPPTATVLVQQGTCEVIAAHRC 54


>AL603832-11|CAI14064.1|  169|Homo sapiens family with sequence
           similarity 19 (chemokine (C-C motif)-like), member A3
           protein.
          Length = 169

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 97  IAALLTFWLRRHSSLIFVDPPSATIVVDDAASGILRSVNC 216
           + AL   WL  H +L  + PP+AT++V      ++ +  C
Sbjct: 15  LLALCLAWLWTHLTLAALQPPTATVLVQQGTCEVIAAHRC 54


>AL603832-10|CAI14063.1|  133|Homo sapiens family with sequence
           similarity 19 (chemokine (C-C motif)-like), member A3
           protein.
          Length = 133

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 97  IAALLTFWLRRHSSLIFVDPPSATIVVDDAASGILRSVNC 216
           + AL   WL  H +L  + PP+AT++V      ++ +  C
Sbjct: 15  LLALCLAWLWTHLTLAALQPPTATVLVQQGTCEVIAAHRC 54


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,652,899
Number of Sequences: 237096
Number of extensions: 2006142
Number of successful extensions: 3245
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3245
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)