Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0517.Seq
         (869 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-3060|AAF50875.1|  223|Drosophila melanogaster CG11229-P...    30   3.6  
AY051795-1|AAK93219.1|  541|Drosophila melanogaster LD31064p pro...    30   4.8  
AL033125-6|CAA21829.1|  510|Drosophila melanogaster EG:EG0007.7 ...    30   4.8  
AE014298-602|AAF45923.3|  541|Drosophila melanogaster CG6121-PA ...    30   4.8  
AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3....    29   6.3  
AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan pro...    29   6.3  
AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB...    29   6.3  
AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD...    29   6.3  
AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA...    29   6.3  
AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE...    29   6.3  
AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC...    29   6.3  
AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF...    29   6.3  

>AE014298-3060|AAF50875.1|  223|Drosophila melanogaster CG11229-PA
           protein.
          Length = 223

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 541 ARRLSWVTPGFPSHD-VVKRRPVNCNTTHYRANWVPGPPSS 422
           A R SW      SH  ++    VN + T  R+ W PGPP+S
Sbjct: 170 AGRCSWSPSALWSHILIIFSIVVNASATASRSFWFPGPPAS 210


>AY051795-1|AAK93219.1|  541|Drosophila melanogaster LD31064p
           protein.
          Length = 541

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 523 PNLIALQHIPLSPAGVIAXRPXPXALPNSCAP 618
           P   AL  IP +P G     P P  +PNS AP
Sbjct: 119 PGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 150


>AL033125-6|CAA21829.1|  510|Drosophila melanogaster EG:EG0007.7
           protein.
          Length = 510

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 523 PNLIALQHIPLSPAGVIAXRPXPXALPNSCAP 618
           P   AL  IP +P G     P P  +PNS AP
Sbjct: 87  PGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 118


>AE014298-602|AAF45923.3|  541|Drosophila melanogaster CG6121-PA
           protein.
          Length = 541

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 523 PNLIALQHIPLSPAGVIAXRPXPXALPNSCAP 618
           P   AL  IP +P G     P P  +PNS AP
Sbjct: 119 PGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 150


>AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.1
           protein.
          Length = 2447

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +1

Query: 544 HIPLSPAGVIAXRPXPXALPNSCAP-EWRMAN 636
           H P     VI  +  P  +P SC P EW+ AN
Sbjct: 743 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 774


>AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan
           protein.
          Length = 4223

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +1

Query: 544 HIPLSPAGVIAXRPXPXALPNSCAP-EWRMAN 636
           H P     VI  +  P  +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765


>AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB,
           isoform B protein.
          Length = 3215

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +1

Query: 544 HIPLSPAGVIAXRPXPXALPNSCAP-EWRMAN 636
           H P     VI  +  P  +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765


>AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD,
           isoform D protein.
          Length = 4223

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +1

Query: 544 HIPLSPAGVIAXRPXPXALPNSCAP-EWRMAN 636
           H P     VI  +  P  +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765


>AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA,
           isoform A protein.
          Length = 4179

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +1

Query: 544 HIPLSPAGVIAXRPXPXALPNSCAP-EWRMAN 636
           H P     VI  +  P  +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765


>AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE,
           isoform E protein.
          Length = 4228

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +1

Query: 544 HIPLSPAGVIAXRPXPXALPNSCAP-EWRMAN 636
           H P     VI  +  P  +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765


>AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC,
           isoform C protein.
          Length = 4117

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +1

Query: 544 HIPLSPAGVIAXRPXPXALPNSCAP-EWRMAN 636
           H P     VI  +  P  +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765


>AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF,
            isoform F protein.
          Length = 4629

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +1

Query: 544  HIPLSPAGVIAXRPXPXALPNSCAP-EWRMAN 636
            H P     VI  +  P  +P SC P EW+ AN
Sbjct: 1140 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 1171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,894,758
Number of Sequences: 53049
Number of extensions: 587795
Number of successful extensions: 1521
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)