Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0516.Seq
         (976 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    27   0.85 
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   4.5  
AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450 pr...    24   7.9  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 27.1 bits (57), Expect = 0.85
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 473 RGEGCGQVDRATATNKASGFLLSLGG 550
           R  GC  +   TATN+ SG + +LGG
Sbjct: 421 RPGGCNGLHSTTATNRFSGLVGALGG 446


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 484 TLSPFSSWAMVREMYSTASAGRVIAA 407
           T S  S WA VRE+Y++ ++   +AA
Sbjct: 725 TASGSSGWAEVRELYASNNSIAALAA 750


>AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450
           protein.
          Length = 171

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +3

Query: 369 LWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGERVAGKSTAQRL 512
           L  HP +            A+ VEY   T+ Q+E  ERV  +S  QRL
Sbjct: 69  LAMHPEIQDRAAAEICELLADDVEYTHETLKQMEYLERVIKES--QRL 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 994,505
Number of Sequences: 2352
Number of extensions: 22168
Number of successful extensions: 81
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106474641
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)