Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0514.Seq
         (909 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    38   0.47 
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    38   0.47 
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    38   0.47 
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    38   0.47 
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    35   2.5  
UniRef50_A6SFB1 Cluster: Putative uncharacterized protein; n=1; ...    34   4.4  
UniRef50_Q65980 Cluster: RNA replicase; n=85; Flexiviridae|Rep: ...    33   7.6  

>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 37.5 bits (83), Expect = 0.47
 Identities = 22/44 (50%), Positives = 24/44 (54%)
 Frame = +3

Query: 672 LQRRDXGXPGGYPNXIALQHIPPLASWGNNQXARXDRPFPQQFR 803
           LQRRD   PG         H PP ASW N++ AR DRP  QQ R
Sbjct: 72  LQRRDWENPGVTQLNRLAAH-PPFASWRNSEEARTDRP-SQQLR 113


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 37.5 bits (83), Expect = 0.47
 Identities = 22/44 (50%), Positives = 24/44 (54%)
 Frame = +3

Query: 672 LQRRDXGXPGGYPNXIALQHIPPLASWGNNQXARXDRPFPQQFR 803
           LQRRD   PG         H PP ASW N++ AR DRP  QQ R
Sbjct: 26  LQRRDWENPGVTQLNRLAAH-PPFASWRNSEEARTDRP-SQQLR 67


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 37.5 bits (83), Expect = 0.47
 Identities = 22/44 (50%), Positives = 24/44 (54%)
 Frame = +3

Query: 672 LQRRDXGXPGGYPNXIALQHIPPLASWGNNQXARXDRPFPQQFR 803
           LQRRD   PG         H PP ASW N++ AR DRP  QQ R
Sbjct: 30  LQRRDWENPGVTQLNRLAAH-PPFASWRNSEEARTDRP-SQQLR 71


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 37.5 bits (83), Expect = 0.47
 Identities = 22/44 (50%), Positives = 24/44 (54%)
 Frame = +3

Query: 672 LQRRDXGXPGGYPNXIALQHIPPLASWGNNQXARXDRPFPQQFR 803
           LQRRD   PG         H PP ASW N++ AR DRP  QQ R
Sbjct: 12  LQRRDWENPGVTQLNRLAAH-PPFASWRNSEEARTDRP-SQQLR 53


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 35.1 bits (77), Expect = 2.5
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +2

Query: 611 GGARYPIRPIVSRIT 655
           GGARYPIRPIVSRIT
Sbjct: 261 GGARYPIRPIVSRIT 275


>UniRef50_A6SFB1 Cluster: Putative uncharacterized protein; n=1;
            Botryotinia fuckeliana B05.10|Rep: Putative
            uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 1606

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +2

Query: 11   LFIFLIFCVISYLGIFFCSLQRKRRLF 91
            LF  L+FC+ +YLG++ CSL  ++  F
Sbjct: 1087 LFAMLLFCIATYLGLYICSLFLRKAAF 1113


>UniRef50_Q65980 Cluster: RNA replicase; n=85; Flexiviridae|Rep: RNA
            replicase - Cherry virus A
          Length = 2342

 Score = 33.5 bits (73), Expect = 7.6
 Identities = 18/61 (29%), Positives = 31/61 (50%)
 Frame = -1

Query: 411  NIVYHIFFY*HSHLYDHSNYLCRLLSTNKMEHDYCIVYFSAFSLRNDKGGVKKLILF*KN 232
            N+V   +F  H + Y+  ++L  +LS  ++EH Y +  F   + +  KG  KK  +  K 
Sbjct: 1576 NLVLDSYFLEHLYAYNKGDHLFEILSEKELEHHYNLTRFFVKNSKLLKGESKKKFMETKE 1635

Query: 231  I 229
            I
Sbjct: 1636 I 1636


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,745,965
Number of Sequences: 1657284
Number of extensions: 13226671
Number of successful extensions: 19930
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19914
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)