Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0509.Seq
         (928 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86546-1|BAA13108.1| 2044|Drosophila melanogaster still life typ...    33   0.42 
AY118305-1|AAM48334.1| 2061|Drosophila melanogaster GH10341p pro...    33   0.42 
AE014296-987|AAF50756.3| 2052|Drosophila melanogaster CG5406-PA,...    33   0.42 
AE014296-986|AAS65075.1| 2061|Drosophila melanogaster CG5406-PC,...    33   0.42 
BT010026-1|AAQ22495.1| 1439|Drosophila melanogaster RE05911p pro...    30   5.2  
BT030408-1|ABO52828.1|  732|Drosophila melanogaster IP04158p pro...    29   6.8  
AE014297-3624|AAF56334.1| 1439|Drosophila melanogaster CG6879-PA...    29   6.8  

>D86546-1|BAA13108.1| 2044|Drosophila melanogaster still life type 2
           protein.
          Length = 2044

 Score = 33.5 bits (73), Expect = 0.42
 Identities = 21/67 (31%), Positives = 29/67 (43%)
 Frame = -2

Query: 714 NRCEYLHYDCVRRRPRSLRTIQTSL*LGGYISQHLEGRHKGMRVKHINSYFTGWKSKQDN 535
           +RC  L Y C+RR       +Q +L LG    +H   RH     K  N  F    S  D 
Sbjct: 728 HRCNRLRYQCIRRVVEEAADLQGTLKLGNSRYRH---RHWRSTAKQCNEMFLRKISDDDR 784

Query: 534 LLLSKAI 514
           + L+ A+
Sbjct: 785 MSLTTAV 791


>AY118305-1|AAM48334.1| 2061|Drosophila melanogaster GH10341p
           protein.
          Length = 2061

 Score = 33.5 bits (73), Expect = 0.42
 Identities = 21/67 (31%), Positives = 29/67 (43%)
 Frame = -2

Query: 714 NRCEYLHYDCVRRRPRSLRTIQTSL*LGGYISQHLEGRHKGMRVKHINSYFTGWKSKQDN 535
           +RC  L Y C+RR       +Q +L LG    +H   RH     K  N  F    S  D 
Sbjct: 728 HRCNRLRYQCIRRVVEEAADLQGTLKLGNSRYRH---RHWRSTAKQCNEMFLRKISDDDR 784

Query: 534 LLLSKAI 514
           + L+ A+
Sbjct: 785 MSLTTAV 791


>AE014296-987|AAF50756.3| 2052|Drosophila melanogaster CG5406-PA,
           isoform A protein.
          Length = 2052

 Score = 33.5 bits (73), Expect = 0.42
 Identities = 21/67 (31%), Positives = 29/67 (43%)
 Frame = -2

Query: 714 NRCEYLHYDCVRRRPRSLRTIQTSL*LGGYISQHLEGRHKGMRVKHINSYFTGWKSKQDN 535
           +RC  L Y C+RR       +Q +L LG    +H   RH     K  N  F    S  D 
Sbjct: 728 HRCNRLRYQCIRRVVEEAADLQGTLKLGNSRYRH---RHWRSTAKQCNEMFLRKISDDDR 784

Query: 534 LLLSKAI 514
           + L+ A+
Sbjct: 785 MSLTTAV 791


>AE014296-986|AAS65075.1| 2061|Drosophila melanogaster CG5406-PC,
           isoform C protein.
          Length = 2061

 Score = 33.5 bits (73), Expect = 0.42
 Identities = 21/67 (31%), Positives = 29/67 (43%)
 Frame = -2

Query: 714 NRCEYLHYDCVRRRPRSLRTIQTSL*LGGYISQHLEGRHKGMRVKHINSYFTGWKSKQDN 535
           +RC  L Y C+RR       +Q +L LG    +H   RH     K  N  F    S  D 
Sbjct: 728 HRCNRLRYQCIRRVVEEAADLQGTLKLGNSRYRH---RHWRSTAKQCNEMFLRKISDDDR 784

Query: 534 LLLSKAI 514
           + L+ A+
Sbjct: 785 MSLTTAV 791


>BT010026-1|AAQ22495.1| 1439|Drosophila melanogaster RE05911p
           protein.
          Length = 1439

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 346 SVAFSFATLAISSFHSLYRNNRTSQHLYLNLPNNSIRLH 230
           +VA +FA  A    HSL +N+ T    + N+ NN++ LH
Sbjct: 304 TVANAFAAAAFRFGHSLVQNSYTRCDCHHNVINNNVSLH 342


>BT030408-1|ABO52828.1|  732|Drosophila melanogaster IP04158p
           protein.
          Length = 732

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 346 SVAFSFATLAISSFHSLYRNNRTSQHLYLNLPNNSIRLH 230
           +VA +FA  A    HSL +N+ T    + N+ NN++ LH
Sbjct: 480 TVANAFAAAAFRFGHSLVQNSYTRCDRHHNVINNNVSLH 518


>AE014297-3624|AAF56334.1| 1439|Drosophila melanogaster CG6879-PA
           protein.
          Length = 1439

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 346 SVAFSFATLAISSFHSLYRNNRTSQHLYLNLPNNSIRLH 230
           +VA +FA  A    HSL +N+ T    + N+ NN++ LH
Sbjct: 304 TVANAFAAAAFRFGHSLVQNSYTRCDRHHNVINNNVSLH 342


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,494,979
Number of Sequences: 53049
Number of extensions: 764021
Number of successful extensions: 1424
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4566862269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)