Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0505.Seq
         (960 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    62   3e-11
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   5.9  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 61.7 bits (143), Expect = 3e-11
 Identities = 29/84 (34%), Positives = 45/84 (53%)
 Frame = +1

Query: 256 KDYKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDG 435
           + +  + + VK   + + V+G  E K+DDH   +  F   Y LP   + AD+ + L+SDG
Sbjct: 22  QQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRYMLPKGHNEADIVSSLSSDG 81

Query: 436 YLVVTAPISENVDKTKNTERVVPI 507
            L +T P  E   + KN ER +PI
Sbjct: 82  ILTITCPRKE--IEQKNEERSIPI 103


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 259 DYKKDNLKVKVKGDFIFVQGSQEAKED 339
           ++ K+  K K +GDF  ++  Q+ +ED
Sbjct: 382 EFSKERTKAKNRGDFQKLREKQQIEED 408


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 803,969
Number of Sequences: 2352
Number of extensions: 12813
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105430005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)