Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0505.Seq
(960 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 48 1e-05
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 42 5e-04
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 42 5e-04
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 42 9e-04
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 42 9e-04
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 42 9e-04
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 41 0.002
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 41 0.002
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 41 0.002
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 41 0.002
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 40 0.002
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 38 0.011
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 36 0.043
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 36 0.043
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 36 0.043
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 36 0.043
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 36 0.043
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 33 0.30
AC024799-10|AAK72319.1| 495|Caenorhabditis elegans Cytochrome p... 33 0.40
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 32 0.53
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +1
Query: 262 YKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYL 441
Y D+LKV V + I V+GS KED + S F + LP + V ++LT+DG+L
Sbjct: 90 YDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRRFPLPKAVAPESVQSQLTADGHL 149
Query: 442 VVTAPISE 465
+ A E
Sbjct: 150 TIDAKAPE 157
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 262 YKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYL 441
+K ++LK+ + G + +QG QE K DH F LP + V + L+ DG L
Sbjct: 59 FKPEDLKINLDGRTLSIQGEQELK-TDHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKL 117
Query: 442 VVTAPISENV 471
+ AP E V
Sbjct: 118 SIEAPKKEAV 127
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 262 YKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYL 441
+K ++LK+ + G + +QG QE K DH F LP + V + L+ DG L
Sbjct: 59 FKPEDLKINLDGRTLSIQGEQELK-TDHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKL 117
Query: 442 VVTAPISENV 471
+ AP E V
Sbjct: 118 SIEAPKKEAV 127
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 41.5 bits (93), Expect = 9e-04
Identities = 24/82 (29%), Positives = 42/82 (51%)
Frame = +1
Query: 262 YKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYL 441
+K +NLK+K+ G + ++G QE K +H F LP ++ V + ++++G L
Sbjct: 17 FKPENLKIKLDGRELKIEGIQETK-SEHGYLKRSFSKMILLPEDADLPSVKSAISNEGKL 75
Query: 442 VVTAPISENVDKTKNTERVVPI 507
+ AP K N+ R +PI
Sbjct: 76 QIEAP------KKTNSSRSIPI 91
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 41.5 bits (93), Expect = 9e-04
Identities = 24/82 (29%), Positives = 42/82 (51%)
Frame = +1
Query: 262 YKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYL 441
+K +NLK+K+ G + ++G QE K +H F LP ++ V + ++++G L
Sbjct: 64 FKPENLKIKLDGRELKIEGIQETK-SEHGYLKRSFSKMILLPEDADLPSVKSAISNEGKL 122
Query: 442 VVTAPISENVDKTKNTERVVPI 507
+ AP K N+ R +PI
Sbjct: 123 QIEAP------KKTNSSRSIPI 138
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 41.5 bits (93), Expect = 9e-04
Identities = 24/82 (29%), Positives = 42/82 (51%)
Frame = +1
Query: 262 YKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYL 441
+K +NLK+K+ G + ++G QE K +H F LP ++ V + ++++G L
Sbjct: 63 FKPENLKIKLDGRELKIEGIQETK-SEHGYLKRSFSKMILLPEDADLPSVKSAISNEGKL 121
Query: 442 VVTAPISENVDKTKNTERVVPI 507
+ AP K N+ R +PI
Sbjct: 122 QIEAP------KKTNSSRSIPI 137
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 262 YKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYL 441
+K ++LK+ + G + +QG QE K +H F LP + V + L+ DG L
Sbjct: 59 FKPEDLKINLDGHTLSIQGEQELK-TEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKL 117
Query: 442 VVTAPISENV 471
+ AP E +
Sbjct: 118 SIEAPKKEAI 127
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 262 YKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYL 441
+K ++LK+ + G + +QG QE K +H F LP + V + L+ DG L
Sbjct: 59 FKPEDLKINLDGHTLSIQGEQELK-TEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKL 117
Query: 442 VVTAPISENV 471
+ AP E +
Sbjct: 118 SIEAPKKEAI 127
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 262 YKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYL 441
+K ++LK+ + G + +QG QE K +H F LP + V + L+ DG L
Sbjct: 59 FKPEDLKINLDGHTLSIQGEQELK-TEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKL 117
Query: 442 VVTAPISENV 471
+ AP E +
Sbjct: 118 SIEAPKKEAI 127
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 262 YKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYL 441
+K ++LK+ + G + +QG QE K +H F LP + V + L+ DG L
Sbjct: 60 FKPEDLKINLDGHTLSIQGEQELK-TEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKL 118
Query: 442 VVTAPISENV 471
+ AP E +
Sbjct: 119 SIEAPKKEAI 128
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +1
Query: 259 DYKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGY 438
++K + LKV ++G + +QG + E++H F LP + V L++DG
Sbjct: 60 NFKPEELKVNLEGRQLSIQGEHDV-ENEHGASRKSFSRMILLPEDVDITSVATNLSNDGK 118
Query: 439 LVVTAPISENV 471
L + AP E V
Sbjct: 119 LCIEAPKLEGV 129
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +1
Query: 277 LKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYLVVTA 453
++VKV G + + E + D+H A + Y LP + + V + L + G L +TA
Sbjct: 48 IEVKVSGQELLIHCRHETRSDNHGTVAREINRAYKLPDDVDVSTVKSHLATRGVLTITA 106
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 35.9 bits (79), Expect = 0.043
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +1
Query: 262 YKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYL 441
++ + LKV + + + ++G K D + F Y+LP + +EL+++G L
Sbjct: 66 FEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTGVRPEQIKSELSNNGVL 125
Query: 442 VV 447
V
Sbjct: 126 TV 127
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 35.9 bits (79), Expect = 0.043
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +1
Query: 262 YKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYL 441
++ + LKV + + + ++G K D + F Y+LP + +EL+++G L
Sbjct: 65 FEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTGVRPEQIKSELSNNGVL 124
Query: 442 VV 447
V
Sbjct: 125 TV 126
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 35.9 bits (79), Expect = 0.043
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +1
Query: 259 DYKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGY 438
+YK + + VK + + V E K VF ++ + LP ++ +++ L++DG
Sbjct: 36 NYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFR-EYNQEFLLPRGTNPEQISSTLSTDGV 94
Query: 439 LVVTAPISE 465
L V AP+ +
Sbjct: 95 LTVEAPLPQ 103
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 35.9 bits (79), Expect = 0.043
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +1
Query: 259 DYKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGY 438
+YK + + VK + + V E K VF ++ + LP ++ +++ L++DG
Sbjct: 133 NYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFR-EYNQEFLLPRGTNPEQISSTLSTDGV 191
Query: 439 LVVTAPISE 465
L V AP+ +
Sbjct: 192 LTVEAPLPQ 200
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 35.9 bits (79), Expect = 0.043
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +1
Query: 259 DYKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGY 438
+YK + + VK + + V E K VF ++ + LP ++ +++ L++DG
Sbjct: 147 NYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFR-EYNQEFLLPRGTNPEQISSTLSTDGV 205
Query: 439 LVVTAPISE 465
L V AP+ +
Sbjct: 206 LTVEAPLPQ 214
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 271 DNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYLVVT 450
+++ VKV G I + + + ++ + + TY LP + + V + L S G L +T
Sbjct: 46 NDIDVKVNGIEIIIHLRHDNRPTEYGIVNREVHRTYKLPEDVDPSTVRSHLNSSGVLTIT 105
Query: 451 A 453
A
Sbjct: 106 A 106
>AC024799-10|AAK72319.1| 495|Caenorhabditis elegans Cytochrome p450
family protein33C11 protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.40
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 77 PGQRSYRAXVSITDDQFTFPWLNLSPFSLFAPLWKLIPTFVDIGPRIYADDDKF 238
PG +R I D FTF WL +P+ + + L K+ TF+ G Y D +F
Sbjct: 46 PGYECFRRWTRIYGDVFTF-WLGDTPYVVISSLEKMKETFIKDG-ETYQDKIQF 97
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/66 (21%), Positives = 33/66 (50%)
Frame = +1
Query: 259 DYKKDNLKVKVKGDFIFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGY 438
D K + LK+ ++G + ++ + E+D+ + + LP + +++ L+ DG
Sbjct: 59 DVKPEELKINLEGRKLSIKAEHQEIENDNISTTQTYSKSIVLPEDVDVTHLSSNLSEDGK 118
Query: 439 LVVTAP 456
L++ P
Sbjct: 119 LLIEVP 124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,877,357
Number of Sequences: 27780
Number of extensions: 312359
Number of successful extensions: 881
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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