Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0505.Seq
         (960 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    25   1.0  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   7.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   7.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   9.5  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 25.0 bits (52), Expect = 1.0
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
 Frame = -2

Query: 539 LVLLVRSASLAIGTTRSVFFVLSTFSLIGAVTTRYPSEVSSA---VTSAALEFTGRL*VW 369
           +VL + +  + +G    +  V  T S +  VT  +   ++ A   V  A L F+    V+
Sbjct: 70  IVLAIVNVMVVLGNVLVILAVYHT-SKLRNVTNMFIVSLAVADLMVGLAVLPFSATWEVF 128

Query: 368 KNWLANTSWSSSLASCDPW 312
           K W+    W S   + D W
Sbjct: 129 KVWIFGDLWCSIWLAVDVW 147


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +2

Query: 170 PLWKLIPT 193
           PLWKL+PT
Sbjct: 258 PLWKLLPT 265


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 198 TKVGISFHKGANRLNGERFSH 136
           ++VG  +H+    +N ERF +
Sbjct: 199 SRVGTKYHRSGGLMNVERFPY 219


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 680 ATEKXNVIPHGKRISA*VXX*YT 748
           A E+ NV+P G R+   +   YT
Sbjct: 164 AREEANVVPEGARVPIEIPRDYT 186


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,407
Number of Sequences: 438
Number of extensions: 4170
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31565079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)