Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0498.Seq
(504 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 63 4e-09
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 59 5e-08
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 59 5e-08
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 55 1e-06
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 51 2e-05
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 50 4e-05
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 47 3e-04
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 39 0.056
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 39 0.074
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 38 0.17
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 37 0.22
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 37 0.30
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 34 2.1
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 33 4.8
UniRef50_Q8PHN7 Cluster: Glucose dehydrogenase; n=4; Xanthomonas... 32 8.5
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 62.9 bits (146), Expect = 4e-09
Identities = 45/113 (39%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Frame = -1
Query: 444 GAIXLCKXXXFXPIRKGLLGLTXWESXKTALCKVTRXX---LVPKIPGXXXXXXXXXXXX 274
GAI L K P+R+G G + T CKVT LV IP
Sbjct: 153 GAIILAKLS-IVPVRRGYWGNKIGKPH-TVPCKVTGRCGSVLVRLIPAPRGTGIVS---- 206
Query: 273 SAPIPKNFFRWLGVQDLLTGQLRGSTGTLGNFAKPHTXPIAKTYAYXTPDLWR 115
AP+PK G+ D T RG T TLGNFAK I+KTY+Y TPDLW+
Sbjct: 207 -APVPKKLLMMAGIDDCYTSA-RGCTATLGNFAKATFDAISKTYSYLTPDLWK 257
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 59.3 bits (137), Expect = 5e-08
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = -1
Query: 270 APIPKNFFRWLGVQDLLTGQLRGSTGTLGNFAKPHTXPIAKTYAYXTPDLWR 115
AP+PK G+ D T RG T TLGNFAK I+KTY+Y TPDLW+
Sbjct: 149 APVPKKLLMMAGIDDCYTSA-RGCTATLGNFAKATFDAISKTYSYLTPDLWK 199
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 59.3 bits (137), Expect = 5e-08
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = -1
Query: 270 APIPKNFFRWLGVQDLLTGQLRGSTGTLGNFAKPHTXPIAKTYAYXTPDLWR 115
AP+PK G+ D T RG T TLGNFAK I+KTY+Y TPDLW+
Sbjct: 11 APVPKKLLMMAGIDDCYTSA-RGCTATLGNFAKATFDAISKTYSYLTPDLWK 61
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 54.8 bits (126), Expect = 1e-06
Identities = 42/112 (37%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Frame = -1
Query: 441 AIXLCKXXXFXPIRKGLLGLTXWESXKTALCKVTRXX---LVPKIPGXXXXXXXXXXXXS 271
AI L K P+R+G G + T CKVT LV IP
Sbjct: 98 AIILAKLS-IVPLRQGYWGNKIGKP-NTVPCKVTGHCGSVLVCLIPAPRGTGMVS----- 150
Query: 270 APIPKNFFRWLGVQDLLTGQLRGSTGTLGNFAKPHTXPIAKTYAYXTPDLWR 115
AP+PK G+ D T R T +LGNFAK I+KTY Y TPDLW+
Sbjct: 151 APVPKKLLMMAGIDDCYTSA-RDCTASLGNFAKATFDTISKTYTYLTPDLWK 201
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = -1
Query: 270 APIPKNFFRWLGVQDLLTGQLRGSTGTLGNFAKPHTXPIAKTYAYXTPDLWR 115
AP+PK + + D T RG T TLGNFAK I+K Y+Y TPDLW+
Sbjct: 149 APVPKKLLM-MAIDDCYT-LARGCTATLGNFAKATFDAISKIYSYLTPDLWK 198
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 49.6 bits (113), Expect = 4e-05
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = -1
Query: 270 APIPKNFFRWLGVQDLLTGQLRGSTGTLGNFAKPHTXPIAKTYAYXTPDLW 118
AP+ K F + G++D T Q RGST TLGNF K + TY TP+LW
Sbjct: 180 APVTKRFLQLAGIEDCYT-QSRGSTKTLGNFVKAAFAAASLTYGILTPNLW 229
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 46.8 bits (106), Expect = 3e-04
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = -1
Query: 270 APIPKNFFRWLGVQDLLTGQLRGSTGTLGNFAKPHTXPIAKTYAYXTPDLWR 115
AP+PK + D T RG T TL NF K I+ TY+Y TP+LW+
Sbjct: 188 APVPKKLLLLANIDDCYTSA-RGCTATLDNFDKATFNAISNTYSYLTPNLWK 238
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 39.1 bits (87), Expect = 0.056
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = -1
Query: 270 APIPKNFFRWLGVQDLLTGQLRGSTGTLGNFAKPHTXPIAKTYAYXTPDL 121
AP+PK G+ D + G T TLGNF K I+KT++Y PDL
Sbjct: 183 APVPK-LLMMAGIDD--SSSASGCTATLGNFTKAIFDTISKTHSYLIPDL 229
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 38.7 bits (86), Expect = 0.074
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = -1
Query: 270 APIPKNFFRWLGVQDLLTGQLRGSTGTLGNFAKPHTXPIAKTYAYXTPDLW 118
+P K + GV+D+ T Q G T TL N K I TY + TP+LW
Sbjct: 181 SPAVKKLLQLAGVEDVYT-QSNGKTRTLENTLKAAFVAIGNTYGFLTPNLW 230
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 37.5 bits (83), Expect = 0.17
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = -1
Query: 270 APIPKNFFRWLGVQDLLTGQLRGSTGTLGNFAKPHTXPIAKTYAYXTPDLWRI 112
AP+PK R + D RG T L N K T I+KTY T D WR+
Sbjct: 107 APVPKKLLRMASIDDG-DSLARGCTAILDNVIKA-TYDISKTYVSLTSDFWRL 157
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 37.1 bits (82), Expect = 0.22
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -1
Query: 264 IPKNFFRWLGVQDLLTGQLRGSTGTLGNFAKPHTXPIAKTYAYXTPDL 121
+PK ++ G++D+ T RGST TL NF K H A + Y P L
Sbjct: 10 VPKKVLKFAGIEDVFTSS-RGSTKTLSNFVK-HQMKRALNFQYKPPPL 55
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 36.7 bits (81), Expect = 0.30
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = -1
Query: 258 KNFFRWLGVQDLLTGQLRGSTGTLGNFAKPHTXPIAKTYAYXTPDLWRISR 106
K G+ D+ T RG T TLGN K + +Y + TPDLW +R
Sbjct: 201 KKVLAMAGLHDVYTCS-RGHTRTLGNSVKATYEALKNSYGFLTPDLWAETR 250
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 33.9 bits (74), Expect = 2.1
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 204 GSTGTLGNFAKPHTXPIAKTYAYXTPDLW 118
G T LG AK I+KTY+ TPDLW
Sbjct: 195 GCTDALGRLAKTTFDAISKTYSCLTPDLW 223
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 32.7 bits (71), Expect = 4.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -1
Query: 264 IPKNFFRWLGVQDLLTGQLRGSTGTLGNFAKPHTXPIAKTYAYXTPDLW 118
+ K F G++DL T G+T T NFAK + T + PD W
Sbjct: 170 VNKKIFELAGIKDLYTLSF-GATSTTENFAKASIAALEATSSMILPDQW 217
>UniRef50_Q8PHN7 Cluster: Glucose dehydrogenase; n=4;
Xanthomonas|Rep: Glucose dehydrogenase - Xanthomonas
axonopodis pv. citri
Length = 825
Score = 31.9 bits (69), Expect = 8.5
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -1
Query: 228 DLLTGQLRGSTGTLGNFAKPHTXPIAKTYAYXTPDLWRI 112
D LTGQLR + LGN A P +TY TP++W +
Sbjct: 385 DALTGQLRWAWD-LGNPAITAEPPAGQTYTRSTPNVWSL 422
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,745,576
Number of Sequences: 1657284
Number of extensions: 6611957
Number of successful extensions: 9965
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9960
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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