Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0494.Seq
         (943 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding pr...    27   1.1  
AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5 prot...    26   1.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   4.4  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   5.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   5.8  
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    24   5.8  

>AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding
           protein AgamOBP14 protein.
          Length = 188

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -3

Query: 287 ITVLRCIVAFFASPFSAGESSGASSVPFSLPLLSAASTFLAGDFL 153
           I  L  ++   A   SA ++S    +P     + A STF+  DFL
Sbjct: 6   IATLTVLLVLLAGTASAKKASTIFGMPLQQDPVPATSTFIVSDFL 50


>AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5
           protein.
          Length = 128

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 79  ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESN 195
           +DA    K+    E+   E K+ PVKK P  K++  + N
Sbjct: 65  SDAREMMKKFKVGELIEAERKQIPVKKEPDWKMDQQDDN 103


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 175  VEAAESNGKENGTDEAPEDSPAENGDAKKAT 267
            ++ A+SNG E+G ++  ED   ++ D    T
Sbjct: 1812 LQHADSNGGEDGNEDDDEDDEDDDDDDDDTT 1842


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 73  TMADAAVDKKEVAPEEVTSTEPKESPVKKSP 165
           T    AV      P E+  T+P  SP++ +P
Sbjct: 171 TNTTIAVQPAPTQPHELVGTDPLSSPLQAAP 201


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 856 PXXPWTNRFPRRPKR 812
           P  P  NRFP RP+R
Sbjct: 701 PMSPRPNRFPSRPRR 715


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 436 IIYAWFTAMHQCPLEFNSHP 495
           +++  FT   +CPL F+ HP
Sbjct: 1   MLFKLFTIPFRCPLFFSKHP 20


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,450
Number of Sequences: 2352
Number of extensions: 14908
Number of successful extensions: 39
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)