Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0493.Seq
         (832 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            27   0.93 
AF164151-1|AAD47075.1|  148|Anopheles gambiae translation initia...    24   4.9  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   6.5  
AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    23   8.6  
AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding pr...    23   8.6  
AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding pr...    23   8.6  

>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 26.6 bits (56), Expect = 0.93
 Identities = 22/115 (19%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
 Frame = -1

Query: 475 VVMVTSINKATVSTINRINSDAISCCCCCEEFLITEMYSDKNDVTTKVRIKFVYAKA--- 305
           ++M     K TVS I+   +  I       +F   E+ ++  ++  ++  KF+   +   
Sbjct: 320 LIMKIGNPKVTVSIISETQAQQIQSTNAAADFSAGEIENNIGNLQYQLSNKFLANFSNMR 379

Query: 304 MRPLRSGKQKQHLVRIGSPLIP*FSLIYPQLSYTHFSLS*ALSVWSIMFPSIIII 140
           ++ +  G +K + + +       F+L++ Q S+T       ++VW++  P+++I+
Sbjct: 380 LKKINRGNRKLNKLVVDEK----FALLF-QSSFTLEQEELTVTVWTLSLPAVVIV 429


>AF164151-1|AAD47075.1|  148|Anopheles gambiae translation
           initiation factor 4C (1A) protein.
          Length = 148

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 640 LLGNINMELNSEDGKRRLCKIHKRKR 717
           +LGN  +E    DG +RLC I  + R
Sbjct: 41  MLGNGRLEAMCFDGVKRLCHIRGKLR 66


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 24/78 (30%), Positives = 34/78 (43%)
 Frame = +3

Query: 276 FCFPLRRGLIAFAYTNLILTLVVTSFLSLYISVIRNXXXXXXXEMASELIRLIVDTVALL 455
           F   LRR  + F   NLI+  V  SFLS+ +  + +          S L+ L V    LL
Sbjct: 231 FNITLRRKTL-FYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTV-FFLLL 288

Query: 456 IEVTMTTVFVVALHKKHV 509
            E+   T   V L  K++
Sbjct: 289 AEIIPPTSLTVPLLGKYL 306


>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 288 LRRGLIAFAYTNLILTLVVTSFLSLYISVI 377
           L  G++ F Y  L+ T    SFL+ +IS +
Sbjct: 34  LLTGIMQFVYCCLVGTFPFNSFLAGFISTV 63


>AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding
           protein AgamOBP32 protein.
          Length = 320

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 165 IDQTDKAYDSEKCVYES*G 221
           +D  ++AY+S +C YE  G
Sbjct: 125 VDVCERAYESFRCYYEQYG 143


>AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding
           protein AgamOBP33 protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 165 IDQTDKAYDSEKCVYES*G 221
           +D  ++AY+S +C YE  G
Sbjct: 125 VDVCERAYESFRCYYEQYG 143


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 776,275
Number of Sequences: 2352
Number of extensions: 14556
Number of successful extensions: 79
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 87651612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)