Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0493.Seq
(832 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK223089-1|BAD96809.1| 337|Homo sapiens mRNA decapping enzyme v... 37 0.078
BC014532-1|AAH14532.1| 337|Homo sapiens decapping enzyme, scave... 33 0.96
AY077684-1|AAL77216.1| 337|Homo sapiens heat shock-like protein... 33 0.96
AY040771-1|AAK91765.1| 337|Homo sapiens histidine triad protein... 33 0.96
AF532613-1|AAM90310.1| 337|Homo sapiens scavenger mRNA decappin... 33 0.96
Y16280-1|CAA76153.1| 481|Homo sapiens ETBR-LP-2 protein protein. 26 6.6
BC050334-1|AAH50334.1| 481|Homo sapiens G protein-coupled recep... 26 6.6
AL592300-1|CAI13106.1| 481|Homo sapiens G protein-coupled recep... 26 6.6
AK222639-1|BAD96359.1| 481|Homo sapiens G-protein coupled recep... 26 6.6
BC001953-1|AAH01953.1| 245|Homo sapiens 3-hydroxybutyrate dehyd... 30 8.9
AY358841-1|AAQ89200.1| 245|Homo sapiens GRLD6308 protein. 30 8.9
>AK223089-1|BAD96809.1| 337|Homo sapiens mRNA decapping enzyme
variant protein.
Length = 337
Score = 37.1 bits (82), Expect = 0.078
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +1
Query: 496 IRNMSPYETLPILRNNLLHNRVRVQPRLHQQGDSKRIILNFIPT 627
+R+++P E LP+LRNNL + + R +GD R+ L+++P+
Sbjct: 230 LRDLTP-EHLPLLRNNLHQGQEAILQRYRMKGDHLRVYLHYLPS 272
>BC014532-1|AAH14532.1| 337|Homo sapiens decapping enzyme,
scavenger protein.
Length = 337
Score = 33.5 bits (73), Expect = 0.96
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +1
Query: 496 IRNMSPYETLPILRNNLLHNRVRVQPRLHQQGDSKRIILNFIPT 627
+R+++P E LP+LRN L + + R +GD R+ L+++P+
Sbjct: 230 LRDLTP-EHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPS 272
>AY077684-1|AAL77216.1| 337|Homo sapiens heat shock-like protein 1
protein.
Length = 337
Score = 33.5 bits (73), Expect = 0.96
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +1
Query: 496 IRNMSPYETLPILRNNLLHNRVRVQPRLHQQGDSKRIILNFIPT 627
+R+++P E LP+LRN L + + R +GD R+ L+++P+
Sbjct: 230 LRDLTP-EHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPS 272
>AY040771-1|AAK91765.1| 337|Homo sapiens histidine triad protein
member 5 protein.
Length = 337
Score = 33.5 bits (73), Expect = 0.96
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +1
Query: 496 IRNMSPYETLPILRNNLLHNRVRVQPRLHQQGDSKRIILNFIPT 627
+R+++P E LP+LRN L + + R +GD R+ L+++P+
Sbjct: 230 LRDLTP-EHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPS 272
>AF532613-1|AAM90310.1| 337|Homo sapiens scavenger mRNA decapping
enzyme protein.
Length = 337
Score = 33.5 bits (73), Expect = 0.96
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +1
Query: 496 IRNMSPYETLPILRNNLLHNRVRVQPRLHQQGDSKRIILNFIPT 627
+R+++P E LP+LRN L + + R +GD R+ L+++P+
Sbjct: 230 LRDLTP-EHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPS 272
>Y16280-1|CAA76153.1| 481|Homo sapiens ETBR-LP-2 protein protein.
Length = 481
Score = 26.2 bits (55), Expect(2) = 6.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 403 CCCCCEE 383
CCCCCEE
Sbjct: 432 CCCCCEE 438
Score = 23.0 bits (47), Expect(2) = 6.6
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = -1
Query: 409 ISCCCCC 389
+ CCCCC
Sbjct: 428 LDCCCCC 434
>BC050334-1|AAH50334.1| 481|Homo sapiens G protein-coupled receptor
37 like 1 protein.
Length = 481
Score = 26.2 bits (55), Expect(2) = 6.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 403 CCCCCEE 383
CCCCCEE
Sbjct: 432 CCCCCEE 438
Score = 23.0 bits (47), Expect(2) = 6.6
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = -1
Query: 409 ISCCCCC 389
+ CCCCC
Sbjct: 428 LDCCCCC 434
>AL592300-1|CAI13106.1| 481|Homo sapiens G protein-coupled receptor
37 like 1 protein.
Length = 481
Score = 26.2 bits (55), Expect(2) = 6.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 403 CCCCCEE 383
CCCCCEE
Sbjct: 432 CCCCCEE 438
Score = 23.0 bits (47), Expect(2) = 6.6
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = -1
Query: 409 ISCCCCC 389
+ CCCCC
Sbjct: 428 LDCCCCC 434
>AK222639-1|BAD96359.1| 481|Homo sapiens G-protein coupled receptor
37 like 1 variant protein.
Length = 481
Score = 26.2 bits (55), Expect(2) = 6.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 403 CCCCCEE 383
CCCCCEE
Sbjct: 432 CCCCCEE 438
Score = 23.0 bits (47), Expect(2) = 6.6
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = -1
Query: 409 ISCCCCC 389
+ CCCCC
Sbjct: 428 LDCCCCC 434
>BC001953-1|AAH01953.1| 245|Homo sapiens 3-hydroxybutyrate
dehydrogenase, type 2 protein.
Length = 245
Score = 30.3 bits (65), Expect = 8.9
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +2
Query: 209 RKLRINERKSRNQWRSNSNKMLFLFPATERSHRFCI---HEFDPDFSSDVVFITVHLRNK 379
R L + ++K +Q+ S ++ LF H + E D DFS ++ +++L K
Sbjct: 55 RVLDVTKKKQIDQFASEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIK 114
Query: 380 KLLA---ATAAGNGIGIDTVDSGHRGFVNR 460
L A +GN I + +V S +G VNR
Sbjct: 115 AFLPKMLAQKSGNIINMSSVASSVKGVVNR 144
>AY358841-1|AAQ89200.1| 245|Homo sapiens GRLD6308 protein.
Length = 245
Score = 30.3 bits (65), Expect = 8.9
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +2
Query: 209 RKLRINERKSRNQWRSNSNKMLFLFPATERSHRFCI---HEFDPDFSSDVVFITVHLRNK 379
R L + ++K +Q+ S ++ LF H + E D DFS ++ +++L K
Sbjct: 55 RVLDVTKKKQIDQFASEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIK 114
Query: 380 KLLA---ATAAGNGIGIDTVDSGHRGFVNR 460
L A +GN I + +V S +G VNR
Sbjct: 115 AFLPKMLAQKSGNIINMSSVASSVKGVVNR 144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,083,650
Number of Sequences: 237096
Number of extensions: 2176583
Number of successful extensions: 7493
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7480
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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