Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0493.Seq
         (832 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113326-1|AAM29331.1|  133|Drosophila melanogaster AT28918p pro...    32   1.1  
AE014134-2594|AAN10899.1|  133|Drosophila melanogaster CG31733-P...    32   1.1  
AE014134-2593|AAN10898.1|  208|Drosophila melanogaster CG31733-P...    32   1.1  
AE013599-1821|AAF58297.2|  260|Drosophila melanogaster CG13353-P...    30   3.4  

>AY113326-1|AAM29331.1|  133|Drosophila melanogaster AT28918p
           protein.
          Length = 133

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 255 PILTRCCFCFPLRRGLIAFAYTNLILTLVVT 347
           PI+ + C+CF LR G  + AY  L + ++ T
Sbjct: 2   PIIKKFCYCFSLRIGAFSIAYAGLTMDVLDT 32


>AE014134-2594|AAN10899.1|  133|Drosophila melanogaster CG31733-PA,
           isoform A protein.
          Length = 133

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 255 PILTRCCFCFPLRRGLIAFAYTNLILTLVVT 347
           PI+ + C+CF LR G  + AY  L + ++ T
Sbjct: 2   PIIKKFCYCFSLRIGAFSIAYAGLTMDVLDT 32


>AE014134-2593|AAN10898.1|  208|Drosophila melanogaster CG31733-PB,
           isoform B protein.
          Length = 208

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 255 PILTRCCFCFPLRRGLIAFAYTNLILTLVVT 347
           PI+ + C+CF LR G  + AY  L + ++ T
Sbjct: 2   PIIKKFCYCFSLRIGAFSIAYAGLTMDVLDT 32


>AE013599-1821|AAF58297.2|  260|Drosophila melanogaster CG13353-PA
           protein.
          Length = 260

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 258 ILTRCCFCFPLRRGLIAFAYTNLILTLVVT 347
           I T+CC+C+ LR G++ F    L   + +T
Sbjct: 111 IFTKCCYCYSLRFGVLLFGCIFLTWFIYIT 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,646,196
Number of Sequences: 53049
Number of extensions: 662885
Number of successful extensions: 1692
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)