Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0491.Seq
         (662 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.0  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          23   3.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   4.5  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    22   4.5  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    22   4.5  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   6.0  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   6.0  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   7.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.9  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +2

Query: 104 CSRPVRAGSTGTRAACSGWA*RCAP 178
           C+  +  G  G   AC GW  +  P
Sbjct: 596 CAEEIGRGQYGIVFACDGWGGKAGP 620


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +2

Query: 104 CSRPVRAGSTGTRAACSGWA*RCAP 178
           C+  +  G  G   AC GW  +  P
Sbjct: 634 CAEEIGRGQYGIVFACDGWGGKAGP 658


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 196 RKWTRPRGTASGPSRTG 146
           R W+RPR +A   S+ G
Sbjct: 45  RSWSRPRESAQTTSKAG 61


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +1

Query: 88  GKSHWVFEARQSRVNRNESRLFWMGLTLCPLVWSTF 195
           G +HW    R+S   RN  R+    +    + W+ F
Sbjct: 266 GTNHWDSGRRKSAAQRNVIRMLVAVVVAFFICWAPF 301


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 231 DAPSIDRLTLTGANLYGYIKC 293
           D   IDR+   G  L  YIKC
Sbjct: 26  DDMDIDRILQNGRILTNYIKC 46


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 231 DAPSIDRLTLTGANLYGYIKC 293
           D   IDR+   G  L  YIKC
Sbjct: 26  DDMDIDRILQNGRILTNYIKC 46


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 196 RKWTRPRGTASGPSRTG 146
           R W+RPR  A   S+ G
Sbjct: 166 RSWSRPREPAQTTSKAG 182


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 135 EREPPVLDGPDAVPL 179
           + +  VLDGPD+ PL
Sbjct: 149 DHQGSVLDGPDSPPL 163


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 381 SQPTPPNAGNTGVV*TRL 434
           +QPTPP+A   G   T L
Sbjct: 296 TQPTPPSATLVGTTITHL 313


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/38 (31%), Positives = 14/38 (36%)
 Frame = +2

Query: 350 DIPKRTCLYVLATHAAQRWQHWCRLNKINEDAYLGMIF 463
           DIP    L V  +H    W     L      A  GM+F
Sbjct: 246 DIPNELVLEVPLSHPTYDWFEKLELKWFAVPAVSGMVF 283


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,556
Number of Sequences: 438
Number of extensions: 3225
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)