Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0487.Seq
         (923 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   1.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   1.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   4.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   4.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   7.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   7.8  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 638 ILPSCFCSPIKRWVKV 685
           IL SCFC P K W+++
Sbjct: 96  ILNSCFCDPAK-WIRL 110


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 638 ILPSCFCSPIKRWVKV 685
           IL SCFC P K W+++
Sbjct: 96  ILNSCFCDPAK-WIRL 110


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 608 PCRPYSLFCGILPSCFCS 661
           PC P    C +LP CFCS
Sbjct: 162 PCDP--AVC-VLPDCFCS 176


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -3

Query: 612 HGNVEYSYSSFFNIIEAFIRVIVS*ADTYLNVF 514
           H  V++S   FF +    +  IV    TYL +F
Sbjct: 349 HQKVQFSVLGFFVVDYTLLYSIVGAVTTYLVIF 381


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 612 HGNVEYSYSSFFNIIEAFIRVIVS*ADTYLNVF 514
           H  +E+S   FF I    +  IV     YL +F
Sbjct: 339 HQKLEFSACGFFLINGTLLHTIVGAVTVYLIMF 371


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 612 HGNVEYSYSSFFNIIEAFIRVIVS*ADTYLNVF 514
           H  +E+S   FF I    +  IV     YL +F
Sbjct: 164 HQKLEFSACGFFLINGTLLHTIVGAVTVYLIMF 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,925
Number of Sequences: 336
Number of extensions: 3456
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25858250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)