Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0484.Seq
         (961 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    23   2.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   4.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   4.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.2  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   8.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   8.1  

>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 862 ISANLKFGGLGFLXTRRLILPSPGEGPTXD 773
           ++ N + G LGFL    L L  PG     D
Sbjct: 107 VTVNYRLGMLGFLCLEDLALEVPGNAGFKD 136


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 313 YILRFTCLLYNMIFFLYTYIF 375
           ++ RF CL +   FF  +YI+
Sbjct: 75  FMSRFLCLPFYSYFFYLSYIY 95


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 313 YILRFTCLLYNMIFFLYTYIF 375
           ++ RF CL +   FF  +YI+
Sbjct: 31  FMSRFLCLPFYSYFFYLSYIY 51


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 122 YFVFILCIYLLGVLKLYCVYF 184
           YF +   I+ + +L L C+Y+
Sbjct: 115 YFYYAFIIFTVHLLFLLCIYY 135



 Score = 21.8 bits (44), Expect = 8.1
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +2

Query: 122 YFVFILCIYLLGVLKLYCVYF 184
           YF +   ++ + +L L C+Y+
Sbjct: 240 YFYYAFILFTVHLLLLVCIYY 260


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 740 KWVPRLEDSEPP 705
           KW PR E S PP
Sbjct: 118 KWCPRREWSSPP 129


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 740 KWVPRLEDSEPP 705
           KW PR E S PP
Sbjct: 274 KWCPRREWSSPP 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,841
Number of Sequences: 336
Number of extensions: 4516
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27099446
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)