Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0483.Seq
         (939 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ090887-1|AAY99645.1| 1196|Homo sapiens AHI1 protein.                 31   6.0  
AL133544-3|CAI22523.1| 1168|Homo sapiens protein (  the 5' end o...    31   6.0  
AL049552-2|CAI20387.1| 1168|Homo sapiens protein (  protein, a n...    31   6.0  
AL023693-5|CAI20201.1| 1168|Homo sapiens protein ( Human DNA seq...    31   6.0  
AK092262-1|BAC03840.1| 1196|Homo sapiens protein ( Homo sapiens ...    31   6.0  
AJ606362-1|CAE54481.1| 1196|Homo sapiens AHI1 protein protein.         31   6.0  
AJ459824-1|CAD30871.1| 1196|Homo sapiens AHI1 protein protein.         31   6.0  

>DQ090887-1|AAY99645.1| 1196|Homo sapiens AHI1 protein.
          Length = 1196

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 22/70 (31%), Positives = 35/70 (50%)
 Frame = -1

Query: 240 YHSPAPMFSRRAQIQNNYNIIYFASVQRRDKYIIYLSN*ETNELTSKKII*FNYFNMLTP 61
           Y  P+  F R  ++  + NIIY  S  + D YI+  S+  T  +   +I   N F +L P
Sbjct: 639 YEIPSGRFMR--ELCGHLNIIYDLSWSKDDHYILTSSSDGTARIWKNEINNTNTFRVL-P 695

Query: 60  PPLLIITSEF 31
            P  + T++F
Sbjct: 696 HPSFVYTAKF 705


>AL133544-3|CAI22523.1| 1168|Homo sapiens protein (  the 5' end of a
           novel gene and).).
          Length = 1168

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 22/70 (31%), Positives = 35/70 (50%)
 Frame = -1

Query: 240 YHSPAPMFSRRAQIQNNYNIIYFASVQRRDKYIIYLSN*ETNELTSKKII*FNYFNMLTP 61
           Y  P+  F R  ++  + NIIY  S  + D YI+  S+  T  +   +I   N F +L P
Sbjct: 639 YEIPSGRFMR--ELCGHLNIIYDLSWSKDDHYILTSSSDGTARIWKNEINNTNTFRVL-P 695

Query: 60  PPLLIITSEF 31
            P  + T++F
Sbjct: 696 HPSFVYTAKF 705


>AL049552-2|CAI20387.1| 1168|Homo sapiens protein (  protein, a
           novel gene and a  ).).
          Length = 1168

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 22/70 (31%), Positives = 35/70 (50%)
 Frame = -1

Query: 240 YHSPAPMFSRRAQIQNNYNIIYFASVQRRDKYIIYLSN*ETNELTSKKII*FNYFNMLTP 61
           Y  P+  F R  ++  + NIIY  S  + D YI+  S+  T  +   +I   N F +L P
Sbjct: 639 YEIPSGRFMR--ELCGHLNIIYDLSWSKDDHYILTSSSDGTARIWKNEINNTNTFRVL-P 695

Query: 60  PPLLIITSEF 31
            P  + T++F
Sbjct: 696 HPSFVYTAKF 705


>AL023693-5|CAI20201.1| 1168|Homo sapiens protein ( Human DNA
           sequence from clone RP1-32B1 on chromosome 6q22.33-23.3 
           Contains the MYB gene for v-myb myeloblastosis viral
           oncogene  ).
          Length = 1168

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 22/70 (31%), Positives = 35/70 (50%)
 Frame = -1

Query: 240 YHSPAPMFSRRAQIQNNYNIIYFASVQRRDKYIIYLSN*ETNELTSKKII*FNYFNMLTP 61
           Y  P+  F R  ++  + NIIY  S  + D YI+  S+  T  +   +I   N F +L P
Sbjct: 639 YEIPSGRFMR--ELCGHLNIIYDLSWSKDDHYILTSSSDGTARIWKNEINNTNTFRVL-P 695

Query: 60  PPLLIITSEF 31
            P  + T++F
Sbjct: 696 HPSFVYTAKF 705


>AK092262-1|BAC03840.1| 1196|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34943 fis, clone NT2RP7007580. ).
          Length = 1196

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 22/70 (31%), Positives = 35/70 (50%)
 Frame = -1

Query: 240 YHSPAPMFSRRAQIQNNYNIIYFASVQRRDKYIIYLSN*ETNELTSKKII*FNYFNMLTP 61
           Y  P+  F R  ++  + NIIY  S  + D YI+  S+  T  +   +I   N F +L P
Sbjct: 639 YEIPSGRFMR--ELCGHLNIIYDLSWSKDDHYILTSSSDGTARIWKNEINNTNTFRVL-P 695

Query: 60  PPLLIITSEF 31
            P  + T++F
Sbjct: 696 HPSFVYTAKF 705


>AJ606362-1|CAE54481.1| 1196|Homo sapiens AHI1 protein protein.
          Length = 1196

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 22/70 (31%), Positives = 35/70 (50%)
 Frame = -1

Query: 240 YHSPAPMFSRRAQIQNNYNIIYFASVQRRDKYIIYLSN*ETNELTSKKII*FNYFNMLTP 61
           Y  P+  F R  ++  + NIIY  S  + D YI+  S+  T  +   +I   N F +L P
Sbjct: 639 YEIPSGRFMR--ELCGHLNIIYDLSWSKDDHYILTSSSDGTARIWKNEINNTNTFRVL-P 695

Query: 60  PPLLIITSEF 31
            P  + T++F
Sbjct: 696 HPSFVYTAKF 705


>AJ459824-1|CAD30871.1| 1196|Homo sapiens AHI1 protein protein.
          Length = 1196

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 22/70 (31%), Positives = 35/70 (50%)
 Frame = -1

Query: 240 YHSPAPMFSRRAQIQNNYNIIYFASVQRRDKYIIYLSN*ETNELTSKKII*FNYFNMLTP 61
           Y  P+  F R  ++  + NIIY  S  + D YI+  S+  T  +   +I   N F +L P
Sbjct: 639 YEIPSGRFMR--ELCGHLNIIYDLSWSKDDHYILTSSSDGTARIWKNEINNTNTFRVL-P 695

Query: 60  PPLLIITSEF 31
            P  + T++F
Sbjct: 696 HPSFVYTAKF 705


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,047,592
Number of Sequences: 237096
Number of extensions: 2038146
Number of successful extensions: 4177
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4174
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12325533684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)