Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0476.Seq
         (798 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54D76 Cluster: NAD+ kinase family protein; n=1; Dictyo...    37   0.51 
UniRef50_A1WSM6 Cluster: Putative uncharacterized protein precur...    34   3.6  
UniRef50_Q9VTV6 Cluster: CG5620-PA, isoform A; n=17; Eumetazoa|R...    34   3.6  
UniRef50_A6QTM3 Cluster: Predicted protein; n=2; Onygenales|Rep:...    33   6.3  
UniRef50_Q0W0S8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  
UniRef50_A4M1W1 Cluster: Sporulation domain protein precursor; n...    33   8.3  

>UniRef50_Q54D76 Cluster: NAD+ kinase family protein; n=1;
           Dictyostelium discoideum AX4|Rep: NAD+ kinase family
           protein - Dictyostelium discoideum AX4
          Length = 857

 Score = 37.1 bits (82), Expect = 0.51
 Identities = 22/74 (29%), Positives = 34/74 (45%)
 Frame = -1

Query: 405 KLLIPRNLEIKYLEINPAILSTCTPSTVLSLHTALPVDPPVPLSSAYRPLNTALFRKKNT 226
           +LL+     +K LE+NP +  T T +T  +   +    P  PLS      ++ L +  N 
Sbjct: 357 QLLLEDEPSLKALELNPQLADTTTTTTATTTTPSSAETPNTPLSMNSLESSSNLLKSTNL 416

Query: 225 NFPNSRSGXRSLAD 184
           N P   S  +SL D
Sbjct: 417 NKPQKNSISKSLDD 430


>UniRef50_A1WSM6 Cluster: Putative uncharacterized protein
           precursor; n=1; Verminephrobacter eiseniae EF01-2|Rep:
           Putative uncharacterized protein precursor -
           Verminephrobacter eiseniae (strain EF01-2)
          Length = 495

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 23/72 (31%), Positives = 33/72 (45%)
 Frame = -1

Query: 399 LIPRNLEIKYLEINPAILSTCTPSTVLSLHTALPVDPPVPLSSAYRPLNTALFRKKNTNF 220
           L+PR L ++ L I+ A ++T     V  L  A P   P P  +   PL     +++ TN 
Sbjct: 252 LLPRGLPLQSLRIDLADINTLAQVGVSGLVDATPASAPPPQFAPRNPLYALRHQQRRTNP 311

Query: 219 PNSRSGXRSLAD 184
             S  G  SL D
Sbjct: 312 LPSGPGEVSLLD 323


>UniRef50_Q9VTV6 Cluster: CG5620-PA, isoform A; n=17; Eumetazoa|Rep:
           CG5620-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 750

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
 Frame = -1

Query: 399 LIPRNLEIKYLEINPAILSTCTPSTVLSLHTALPVDPPVPLSSAYRPL-NTALFRKKNTN 223
           L PR      L+ + AI  + + ST+ ++HT  P  P       Y P  +T     +N  
Sbjct: 570 LAPRRPSTLQLQASGAI--SASNSTLTTIHTTAPQAPAPTDFKYYSPQRSTDSNLMRNYP 627

Query: 222 FPNSRSGXRSLADLRWPTASILIADYEPKPDR 127
           FP +  G R  + +   +  + IA Y+P P R
Sbjct: 628 FPKAARGMRRQSTMSVDSQKVNIAGYQPLPMR 659


>UniRef50_A6QTM3 Cluster: Predicted protein; n=2; Onygenales|Rep:
           Predicted protein - Ajellomyces capsulatus NAm1
          Length = 217

 Score = 33.5 bits (73), Expect = 6.3
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
 Frame = -1

Query: 369 LEINPAILSTCTPSTVLSLHTALPVDPPVPLSSAYRPLNTALFRKKNTNFPNSRSGXRSL 190
           L INP  ++T T S+     ++ P  P +P + + + L T++     + FP + S   SL
Sbjct: 79  LPINPTPITTTTSSS----SSSSPQPPAIPSTLSQQAL-TSIILSYASAFPETASRLTSL 133

Query: 189 ADLRWPTASI--LIADYEPKPDR 127
            DL  P AS+   + + +P+ DR
Sbjct: 134 KDLPIPPASLSASLIELQPRLDR 156


>UniRef50_Q0W0S8 Cluster: Putative uncharacterized protein; n=1;
           uncultured methanogenic archaeon RC-I|Rep: Putative
           uncharacterized protein - Uncultured methanogenic
           archaeon RC-I
          Length = 208

 Score = 33.5 bits (73), Expect = 6.3
 Identities = 20/91 (21%), Positives = 43/91 (47%)
 Frame = -1

Query: 447 IVNYMLSFIYLNL*KLLIPRNLEIKYLEINPAILSTCTPSTVLSLHTALPVDPPVPLSSA 268
           I+ +++S +Y+N+  +   +  + KY+ I   I   C    ++S +  +P D P+P+   
Sbjct: 16  IMIFIISIMYINI-VIKEDQLPDNKYVAIEEEI---CDDGKIISGNNPVPPDAPLPIKFL 71

Query: 267 YRPLNTALFRKKNTNFPNSRSGXRSLADLRW 175
           Y      ++  K+ NFP       +  ++ W
Sbjct: 72  YNRPMAQIYYNKSGNFPPDYPEINNSLNILW 102


>UniRef50_A4M1W1 Cluster: Sporulation domain protein precursor; n=1;
           Geobacter bemidjiensis Bem|Rep: Sporulation domain
           protein precursor - Geobacter bemidjiensis Bem
          Length = 235

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 372 YLEINPAILSTCTPSTVLSLHTALPVD 292
           Y ++ PA+ +  TP+ VLS+  ALPVD
Sbjct: 38  YQDVTPAVAAVATPAPVLSVPVALPVD 64


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,230,891
Number of Sequences: 1657284
Number of extensions: 13012703
Number of successful extensions: 29709
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29699
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)