Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0476.Seq
         (798 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              25   1.1  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              24   1.4  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    24   1.4  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -2

Query: 143 NQSLTEVASSRQRTLHKRIAHVFRLIFRVQCDGDII 36
           NQ +TE ++     +H +I  +F+ I + +   DI+
Sbjct: 98  NQLITECSAISDTNVHLKITKIFQCITKFKTINDIL 133


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 243 REQY*EVGRQRTGGRGDPRAKRCEG 317
           +++Y E+GR +    GD    +CEG
Sbjct: 47  KDEYDEIGRLKRTCSGDISVTKCEG 71


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 243 REQY*EVGRQRTGGRGDPRAKRCEG 317
           +++Y E+GR +    GD    +CEG
Sbjct: 47  KDEYDEIGRLKRTCSGDISVTKCEG 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,651
Number of Sequences: 438
Number of extensions: 4109
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)