Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0472.Seq
(657 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol p... 80 1e-15
At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP pr... 79 3e-15
At4g11320.1 68417.m01828 cysteine proteinase, putative contains ... 76 2e-14
At4g11310.1 68417.m01827 cysteine proteinase, putative contains ... 76 2e-14
At4g36880.1 68417.m05229 cysteine proteinase, putative strong si... 75 3e-14
At1g47128.1 68414.m05222 cysteine proteinase (RD21A) / thiol pro... 75 6e-14
At5g50260.1 68418.m06224 cysteine proteinase, putative similar t... 74 7e-14
At3g48350.1 68416.m05277 cysteine proteinase, putative similar t... 73 1e-13
At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol p... 71 5e-13
At1g29080.1 68414.m03560 peptidase C1A papain family protein con... 69 2e-12
At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3) ... 69 3e-12
At1g29090.1 68414.m03561 peptidase C1A papain family protein con... 67 8e-12
At5g45890.1 68418.m05644 senescence-specific SAG12 protein (SAG1... 67 1e-11
At4g23520.1 68417.m03390 cysteine proteinase, putative contains ... 66 1e-11
At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XC... 66 3e-11
At3g49340.1 68416.m05394 cysteine proteinase, putative contains ... 65 3e-11
At3g48340.1 68416.m05276 cysteine proteinase, putative similar t... 65 3e-11
At3g45310.1 68416.m04892 cysteine proteinase, putative similar t... 65 3e-11
At2g27420.1 68415.m03314 cysteine proteinase, putative contains ... 64 8e-11
At1g06260.1 68414.m00662 cysteine proteinase, putative contains ... 64 8e-11
At3g19400.1 68416.m02461 cysteine proteinase, putative non-conse... 64 1e-10
At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XC... 62 3e-10
At3g43960.1 68416.m04706 cysteine proteinase, putative contains ... 62 4e-10
At1g29110.1 68414.m03563 cysteine proteinase, putative contains ... 61 7e-10
At2g34080.1 68415.m04172 cysteine proteinase, putative contains ... 59 2e-09
At1g02305.1 68414.m00175 cathepsin B-like cysteine protease, put... 52 3e-07
At4g01610.2 68417.m00211 cathepsin B-like cysteine protease, put... 52 4e-07
At4g01610.1 68417.m00210 cathepsin B-like cysteine protease, put... 52 4e-07
At1g02300.1 68414.m00173 cathepsin B-like cysteine protease, put... 52 4e-07
At4g16190.1 68417.m02457 cysteine proteinase, putative contains ... 50 1e-06
At3g54940.3 68416.m06091 cysteine proteinase, putative contains ... 49 3e-06
At2g21430.1 68415.m02550 cysteine proteinase A494, putative / th... 42 4e-04
At4g39090.1 68417.m05535 cysteine proteinase RD19a (RD19A) / thi... 41 6e-04
At5g17140.1 68418.m02008 cysteine proteinase-related low similar... 32 0.29
At5g55550.3 68418.m06922 RNA recognition motif (RRM)-containing ... 31 0.67
At5g55550.2 68418.m06921 RNA recognition motif (RRM)-containing ... 31 0.67
At5g55550.1 68418.m06920 RNA recognition motif (RRM)-containing ... 31 0.67
At5g05050.1 68418.m00536 peptidase C1A papain family protein wea... 27 8.3
At1g20740.1 68414.m02598 expressed protein ; expression supporte... 27 8.3
>At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol
protease, putative similar to cysteine proteinase RD21A
precursor (thiol protease) GI:435619, SP:P43297 from
[Arabidopsis thaliana]
Length = 463
Score = 79.8 bits (188), Expect = 1e-15
Identities = 42/76 (55%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Frame = -1
Query: 651 SFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRN 472
+FQLYSSGV+ + T+LDHGV+ VGYGT E G DYW G WGE GYIKM RN
Sbjct: 279 AFQLYSSGVF--DGLCGTELDHGVVAVGYGT-ENGKDYWIVRNSWGNRWGESGYIKMARN 335
Query: 471 ---KNNRCGIASSASY 433
+CGIA ASY
Sbjct: 336 IEAPTGKCGIAMEASY 351
>At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP
protein (AALP) identical to AALP protein GI:7230640 from
[Arabidopsis thaliana]; similar to barley aleurain
Length = 358
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/78 (52%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = -1
Query: 651 SFQLYSSGVYNEEECSST--DLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMI 478
SF+LY SGVY + C ST D++H VL VGYG E GV YW + G WG+ GY KM
Sbjct: 282 SFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGV-EDGVPYWLIKNSWGADWGDKGYFKME 340
Query: 477 RNKNNRCGIASSASYXXV 424
K N CGIA+ ASY V
Sbjct: 341 MGK-NMCGIATCASYPVV 357
>At4g11320.1 68417.m01828 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 371
Score = 76.2 bits (179), Expect = 2e-14
Identities = 42/75 (56%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = -1
Query: 648 FQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRNK 469
FQLY SGV+ + C T+L+HGV+VVGYGT E G DYW + G WGE GY+KM RN
Sbjct: 286 FQLYESGVF-DGTCG-TNLNHGVVVVGYGT-ENGRDYWIVKNSRGDTWGEAGYMKMARNI 342
Query: 468 NN---RCGIASSASY 433
N CGIA ASY
Sbjct: 343 ANPRGLCGIAMRASY 357
>At4g11310.1 68417.m01827 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 364
Score = 75.8 bits (178), Expect = 2e-14
Identities = 42/75 (56%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = -1
Query: 648 FQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRNK 469
FQLY SGV+ + C T+L+HGV+VVGYGT E G DYW + G WGE GY+KM RN
Sbjct: 279 FQLYESGVF-DGSCG-TNLNHGVVVVGYGT-ENGRDYWLVKNSRGITWGEAGYMKMARNI 335
Query: 468 NN---RCGIASSASY 433
N CGIA ASY
Sbjct: 336 ANPRGLCGIAMRASY 350
>At4g36880.1 68417.m05229 cysteine proteinase, putative strong
similarity to cysteine proteinase COT44 precursor
SP:P25251 from [Brassica napus] (Rape)
Length = 376
Score = 75.4 bits (177), Expect = 3e-14
Identities = 40/76 (52%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Frame = -1
Query: 648 FQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRN- 472
FQ Y SG++ C T+LDH V+ VGYG+ E GVDYW GP WGE GYI+M RN
Sbjct: 287 FQHYQSGIFTGS-CG-TNLDHAVVAVGYGS-ENGVDYWIVRNSWGPRWGEEGYIRMERNL 343
Query: 471 ---KNNRCGIASSASY 433
K+ +CGIA ASY
Sbjct: 344 AASKSGKCGIAVEASY 359
>At1g47128.1 68414.m05222 cysteine proteinase (RD21A) / thiol
protease identical to SP|P43297 Cysteine proteinase
RD21A precursor (EC 3.4.22.-) {Arabidopsis thaliana},
thiol protease RD21A SP:P43297 from [Arabidopsis
thaliana]
Length = 462
Score = 74.5 bits (175), Expect = 6e-14
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Frame = -1
Query: 651 SFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRN 472
+FQLY SG++ + C T LDHGV+ VGYGT E G DYW G WGE GY++M RN
Sbjct: 278 AFQLYDSGIF-DGSCG-TQLDHGVVAVGYGT-ENGKDYWIVRNSWGKSWGESGYLRMARN 334
Query: 471 ---KNNRCGIASSASY 433
+ +CGIA SY
Sbjct: 335 IASSSGKCGIAIEPSY 350
>At5g50260.1 68418.m06224 cysteine proteinase, putative similar to
cysteine endopeptidase precursor CysEP GI:2944446 from
[Ricinus communis]
Length = 361
Score = 74.1 bits (174), Expect = 7e-14
Identities = 39/77 (50%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Frame = -1
Query: 654 TSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKM-- 481
+ FQ YS GV+ C T+L+HGV VVGYGT G YW + G WGE GYI+M
Sbjct: 266 SDFQFYSEGVFTGR-CG-TELNHGVAVVGYGTTIDGTKYWIVKNSWGEEWGEKGYIRMQR 323
Query: 480 -IRNKNNRCGIASSASY 433
IR+K CGIA ASY
Sbjct: 324 GIRHKEGLCGIAMEASY 340
>At3g48350.1 68416.m05277 cysteine proteinase, putative similar to
cysteine endopeptidase precursor [Ricinus communis]
GI:2944446; contains Pfam profile PF00112: Papain family
cysteine protease
Length = 364
Score = 73.3 bits (172), Expect = 1e-13
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Frame = -1
Query: 654 TSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKM-- 481
+ FQLYS GV+ E C T L+HGV++VGYG + G YW GP WGE GY+++
Sbjct: 267 SDFQLYSEGVFIGE-CG-TQLNHGVVIVGYGETKNGTKYWIVRNSWGPEWGEGGYVRIER 324
Query: 480 -IRNKNNRCGIASSASY 433
I RCGIA ASY
Sbjct: 325 GISENEGRCGIAMEASY 341
>At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol
protease, putative contains similarity to cysteine
proteinase RD21A (thiol protease) GI:435619, SP:P43297
from [Arabidopsis thaliana]
Length = 452
Score = 71.3 bits (167), Expect = 5e-13
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Frame = -1
Query: 651 SFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRN 472
+FQLY+SGV+ C T LDHGV+ VGYG+ E G DYW G WGE GY K+ RN
Sbjct: 271 AFQLYTSGVFTGT-CG-TSLDHGVVAVGYGS-EGGQDYWIVRNSWGSNWGESGYFKLERN 327
Query: 471 ---KNNRCGIASSASY 433
+ +CG+A ASY
Sbjct: 328 IKESSGKCGVAMMASY 343
>At1g29080.1 68414.m03560 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 346
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = -1
Query: 648 FQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRN- 472
F YS GVYN C T ++H V +VGYGT +G+ YW + G WGE GYI++ R+
Sbjct: 270 FVHYSGGVYNARNCG-TSVNHAVTLVGYGTSPEGMKYWLAKNSWGKTWGENGYIRIRRDV 328
Query: 471 --KNNRCGIASSASY 433
CG+A ASY
Sbjct: 329 EWPQGMCGVAQYASY 343
>At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3)
identical to papain-like cysteine peptidase XBCP3
GI:14600257 from [Arabidopsis thaliana]; contains Pfam
profiles PF00112: Papain family cysteine protease and
PF00396: Granulin
Length = 437
Score = 68.9 bits (161), Expect = 3e-12
Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Frame = -1
Query: 651 SFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRN 472
+FQLYSSG+++ CS T LDH VL+VGYG+ + GVDYW + G WG G++ M RN
Sbjct: 259 AFQLYSSGIFSGP-CS-TSLDHAVLIVGYGS-QNGVDYWIVKNSWGKSWGMDGFMHMQRN 315
Query: 471 KNNR---CGIASSASY 433
N CGI ASY
Sbjct: 316 TENSDGVCGINMLASY 331
>At1g29090.1 68414.m03561 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 355
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = -1
Query: 648 FQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRN- 472
F YS GVY+E C T+++H V VGYGT +G+ YW + G WGE GYI++ R+
Sbjct: 279 FMHYSGGVYDEPYCG-TNVNHAVTFVGYGTSPEGIKYWLAKNSWGETWGENGYIRIRRDV 337
Query: 471 --KNNRCGIASSASY 433
CG+A A Y
Sbjct: 338 AWPQGMCGVAQYAFY 352
>At5g45890.1 68418.m05644 senescence-specific SAG12 protein (SAG12)
/ cysteine proteinase, putative identical to
senescence-specific protein SAG12 GI:1046373 from
[Arabidopsis thaliana]
Length = 346
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = -1
Query: 648 FQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKM---I 478
FQ YSSGV+ E C+ T LDH V +GYG G YW + G WGE GY+++ +
Sbjct: 271 FQFYSSGVFTGE-CT-TYLDHAVTAIGYGESTNGSKYWIIKNSWGTKWGESGYMRIQKDV 328
Query: 477 RNKNNRCGIASSASYXXV 424
++K CG+A ASY +
Sbjct: 329 KDKQGLCGLAMKASYPTI 346
>At4g23520.1 68417.m03390 cysteine proteinase, putative contains
similarity to cysteine proteinase (thiol protease) RD21A
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 356
Score = 66.5 bits (155), Expect = 1e-11
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = -1
Query: 648 FQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRN- 472
F LY S +YN C T+LDH +++VGYG+ E G DYW G WG+ GYIK+ RN
Sbjct: 276 FMLYRSCIYNGP-CG-TNLDHALVIVGYGS-ENGQDYWIVRNSWGTTWGDAGYIKIARNF 332
Query: 471 --KNNRCGIASSASY 433
CGIA ASY
Sbjct: 333 EDPKGLCGIAMLASY 347
>At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 355
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = -1
Query: 648 FQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRN- 472
FQ Y GV+N + C TDLDHGV VGYG+ + G DY + GP WGE G+I+M RN
Sbjct: 279 FQFYKGGVFNGK-CG-TDLDHGVAAVGYGSSK-GSDYVIVKNSWGPRWGEKGFIRMKRNT 335
Query: 471 --KNNRCGIASSASY 433
CGI ASY
Sbjct: 336 GKPEGLCGINKMASY 350
>At3g49340.1 68416.m05394 cysteine proteinase, putative contains
PS00640: Eukaryotic thiol (cysteine) proteases
asparagine active site; similar to cysteine proteinase
GI:535454 from [Alnus glutinosam]
Length = 341
Score = 65.3 bits (152), Expect = 3e-11
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Frame = -1
Query: 639 YSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRNKNN- 463
YS G++N E C T L H V +VGYG E+G+ YW + G WGE GY++++R+ ++
Sbjct: 269 YSGGIFNGE-CG-TQLTHAVTIVGYGVSEEGIKYWLLKNSWGESWGENGYMRIMRDVDSP 326
Query: 462 --RCGIASSASY 433
CG+AS A Y
Sbjct: 327 QGMCGLASLAYY 338
>At3g48340.1 68416.m05276 cysteine proteinase, putative similar to
cysteine endopeptidase precursor [Ricinus communis]
GI:2944446; contains Pfam profile PF00112: Papain family
cysteine protease
Length = 351
Score = 65.3 bits (152), Expect = 3e-11
Identities = 37/77 (48%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = -1
Query: 654 TSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKM-- 481
+ FQ YS GV+ C T+L+HGV VGYG+ E+G YW G WGE GYIK+
Sbjct: 258 SDFQFYSEGVFTGS-CG-TELNHGVAAVGYGS-ERGKKYWIVRNSWGAEWGEGGYIKIER 314
Query: 480 -IRNKNNRCGIASSASY 433
I RCGIA ASY
Sbjct: 315 EIDEPEGRCGIAMEASY 331
>At3g45310.1 68416.m04892 cysteine proteinase, putative similar to
AALP protein GI:7230640 from [Arabidopsis thaliana] and
barley aleurain
Length = 358
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Frame = -1
Query: 648 FQLYSSGVYNEEECSST--DLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIR 475
F+ Y GV+ C +T D++H VL VGYG ++ V YW + G WG+ GY KM
Sbjct: 283 FRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDD-VPYWLIKNSWGGEWGDNGYFKMEM 341
Query: 474 NKNNRCGIASSASYXXV 424
K N CG+A+ +SY V
Sbjct: 342 GK-NMCGVATCSSYPVV 357
>At2g27420.1 68415.m03314 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 348
Score = 64.1 bits (149), Expect = 8e-11
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Frame = -1
Query: 651 SFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRN 472
+F+ YS GV+N E C TDL H V +VGYG E+G YW + G WGE GY+++ R+
Sbjct: 272 AFRHYSGGVFNGE-CG-TDLHHAVTIVGYGMSEEGTKYWVVKNSWGETWGENGYMRIKRD 329
Query: 471 ---KNNRCGIASSASY 433
CG+A A Y
Sbjct: 330 VDAPQGMCGLAILAFY 345
>At1g06260.1 68414.m00662 cysteine proteinase, putative contains
similarity to thiol-protease, pre-pro-TPE4A protein
GI:3688528 [Pisum sativum]
Length = 343
Score = 64.1 bits (149), Expect = 8e-11
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = -1
Query: 648 FQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKM---I 478
FQLYSSGV+ C T+L+HGV VVGYG E YW + G WGE GYI+M +
Sbjct: 269 FQLYSSGVFTNY-CG-TNLNHGVTVVGYGV-EGDQKYWIVKNSWGTGWGEEGYIRMERGV 325
Query: 477 RNKNNRCGIASSASY 433
+CGIA ASY
Sbjct: 326 SEDTGKCGIAMMASY 340
>At3g19400.1 68416.m02461 cysteine proteinase, putative
non-consensus AT acceptor site at exon 3; contains
similarity to cysteine protease CYP1 GI:2828252, TDI-65
GI:5726641 from [Lycopersicon esculentum]
Length = 362
Score = 63.7 bits (148), Expect = 1e-10
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Frame = -1
Query: 651 SFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRN 472
+FQLY SGV C + LDHGV+VVGYG+ G DYW G WG+ GY+K+ RN
Sbjct: 274 AFQLYKSGVMTGT-CGIS-LDHGVVVVGYGSTS-GEDYWIIRNSWGLNWGDSGYVKLQRN 330
Query: 471 KNN---RCGIASSASY 433
++ +CGIA SY
Sbjct: 331 IDDPFGKCGIAMMPSY 346
>At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XCP2)
identical to papain-type cysteine endopeptidase XCP2
GI:6708183 from [Arabidopsis thaliana]
Length = 356
Score = 62.1 bits (144), Expect = 3e-10
Identities = 35/75 (46%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = -1
Query: 648 FQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRN- 472
FQ YS GV+ + C DLDHGV VGYG+ + G DY + GP WGE GYI++ RN
Sbjct: 280 FQFYSGGVF-DGRCG-VDLDHGVAAVGYGSSK-GSDYIIVKNSWGPKWGEKGYIRLKRNT 336
Query: 471 --KNNRCGIASSASY 433
CGI AS+
Sbjct: 337 GKPEGLCGINKMASF 351
>At3g43960.1 68416.m04706 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 376
Score = 61.7 bits (143), Expect = 4e-10
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = -1
Query: 639 YSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRN---K 469
Y SGVY + CS+ DH VL+VGYGT DYW GP WGE GY+++ RN
Sbjct: 274 YKSGVY-KGACSNLWGDHNVLIVGYGTSSDEGDYWLIRNSWGPEWGEGGYLRLQRNFHEP 332
Query: 468 NNRCGIASSASY 433
+C +A + Y
Sbjct: 333 TGKCAVAVAPVY 344
>At1g29110.1 68414.m03563 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 334
Score = 60.9 bits (141), Expect = 7e-10
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Frame = -1
Query: 651 SFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRN 472
SF Y GVY +C TD++H V +VGYGT G++YW + G WGE GY+++ R+
Sbjct: 258 SFGHYKGGVYAGLDCG-TDVNHAVTIVGYGT-MSGLNYWVLKNSWGESWGENGYMRIRRD 315
Query: 471 ---KNNRCGIASSASY 433
CGIA A+Y
Sbjct: 316 VEWPQGMCGIAQVAAY 331
>At2g34080.1 68415.m04172 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 345
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/75 (41%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = -1
Query: 648 FQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRN- 472
F YS GVY + C T +H V VGYGT + G YW + G WGE GYI++ R+
Sbjct: 270 FMHYSGGVY-DGPCG-TSSNHAVTFVGYGTSQDGTKYWLAKNSWGETWGEKGYIRIRRDV 327
Query: 471 --KNNRCGIASSASY 433
CG+A A Y
Sbjct: 328 AWPQGMCGVAQYAFY 342
>At1g02305.1 68414.m00175 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
[Nicotiana rustica] GI:609175; contains Pfam profile
PF00112: Papain family cysteine protease
Length = 362
Score = 52.0 bits (119), Expect = 3e-07
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = -1
Query: 657 HTSFQLYSSGVYNEEECSSTDLD-HGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKM 481
+ F Y SGVY + + T++ H V ++G+GT + G DYW WG+ GY K
Sbjct: 267 YEDFAHYKSGVY--KHITGTNIGGHAVKLIGWGTSDDGEDYWLLANQWNRSWGDDGYFK- 323
Query: 480 IRNKNNRCGI 451
IR N CGI
Sbjct: 324 IRRGTNECGI 333
>At4g01610.2 68417.m00211 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
GI:609175 from [Nicotiana rustica]; contains an
unusually short, 5nt exon
Length = 359
Score = 51.6 bits (118), Expect = 4e-07
Identities = 27/69 (39%), Positives = 34/69 (49%)
Frame = -1
Query: 657 HTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMI 478
+ F Y SGVY S+ H V ++G+GT +G DYW WG+ GY MI
Sbjct: 264 YEDFAHYKSGVYKHITGSNIG-GHAVKLIGWGTSSEGEDYWLMANQWNRGWGDDGYF-MI 321
Query: 477 RNKNNRCGI 451
R N CGI
Sbjct: 322 RRGTNECGI 330
>At4g01610.1 68417.m00210 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
GI:609175 from [Nicotiana rustica]; contains an
unusually short, 5nt exon
Length = 359
Score = 51.6 bits (118), Expect = 4e-07
Identities = 27/69 (39%), Positives = 34/69 (49%)
Frame = -1
Query: 657 HTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMI 478
+ F Y SGVY S+ H V ++G+GT +G DYW WG+ GY MI
Sbjct: 264 YEDFAHYKSGVYKHITGSNIG-GHAVKLIGWGTSSEGEDYWLMANQWNRGWGDDGYF-MI 321
Query: 477 RNKNNRCGI 451
R N CGI
Sbjct: 322 RRGTNECGI 330
>At1g02300.1 68414.m00173 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
GI:609175 from [Nicotiana rustica]
Length = 379
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -1
Query: 657 HTSFQLYSSGVYNEEECSSTDLD-HGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKM 481
+ F Y SGVY + + T + H V ++G+GT + G DYW WG+ GY K
Sbjct: 284 YEDFAHYKSGVY--KYITGTKIGGHAVKLIGWGTSDDGEDYWLLANQWNRSWGDDGYFK- 340
Query: 480 IRNKNNRCGIASS 442
IR N CGI S
Sbjct: 341 IRRGTNECGIEQS 353
>At4g16190.1 68417.m02457 cysteine proteinase, putative contains
similarity to papain-like cysteine proteinase isoform I
GI:7381219 from [Ipomoea batatas]
Length = 373
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Frame = -1
Query: 645 QLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGV------DYWXREELVGPLWGELGYIK 484
Q Y GV CS + DHGVL+VG+G+ YW + G +WGE GY K
Sbjct: 289 QTYIGGVSCPYVCSKSQ-DHGVLLVGFGSSGYAPIRLKEKPYWIIKNSWGAMWGEHGYYK 347
Query: 483 MIRNKNNRCGIASSAS 436
+ R +N CG+ + S
Sbjct: 348 ICRGPHNMCGMDTMVS 363
>At3g54940.3 68416.m06091 cysteine proteinase, putative contains
similarity to cysteine proteinase GI:479060 from
[Glycine max]
Length = 368
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Frame = -1
Query: 645 QLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGV------DYWXREELVGPLWGELGYIK 484
Q Y GV CS +++HGVL+VGYG+ + YW + G WGE GY K
Sbjct: 286 QTYIGGVSCPLICSKRNVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYK 345
Query: 483 MIRNKNNRCGIASSAS 436
+ R ++ CGI S S
Sbjct: 346 LCRG-HDICGINSMVS 360
>At2g21430.1 68415.m02550 cysteine proteinase A494, putative / thiol
protease, putative identical to SP:P43295 Probable
cysteine proteinase A494 precursor [Arabidopsis
thaliana]; strong similarity to cysteine proteinase
RD19A (thiol protease) GI:435618, SP:P43296 from
[Arabidopsis thaliana]
Length = 361
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Frame = -1
Query: 645 QLYSSGVYNEEECSSTDLDHGVLVVGYGTDE------QGVDYWXREELVGPLWGELGYIK 484
Q Y GV CS L+HGVL+VGYG+ + YW + G WGE G+ K
Sbjct: 281 QTYIGGVSCPYICSRR-LNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYK 339
Query: 483 MIRNKNNRCGIASSAS 436
+ + + N CG+ S S
Sbjct: 340 ICKGR-NICGVDSLVS 354
>At4g39090.1 68417.m05535 cysteine proteinase RD19a (RD19A) / thiol
protease identical to cysteine proteinase RD19a, thiol
protease SP:P43296, GI:435618 from [Arabidopsis
thaliana]
Length = 368
Score = 41.1 bits (92), Expect = 6e-04
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = -1
Query: 645 QLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGV------DYWXREELVGPLWGELGYIK 484
Q Y GV C+ L+HGVL+VGYG YW + G WGE G+ K
Sbjct: 284 QTYIGGVSCPYICTRR-LNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYK 342
Query: 483 MIRNKNNRCGIASSAS 436
+ + + N CG+ S S
Sbjct: 343 ICKGR-NICGVDSMVS 357
>At5g17140.1 68418.m02008 cysteine proteinase-related low similarity
to cysteine proteinase [Sitophilus zeamais] GI:2804262
Length = 112
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -1
Query: 645 QLYS-SGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWXREELVGPLWGELGYIKMIRNK 469
Q+Y G+Y E H +++VG+GT + ++ + G WG GY ++I K
Sbjct: 41 QVYEFKGIYVLPEPKENMERHALIIVGFGTTKDSKLFFIVQNTWGTKWGFNGYARIIIKK 100
>At5g55550.3 68418.m06922 RNA recognition motif (RRM)-containing
protein similar to DAZ associated protein 1 [Homo
sapiens] GI:8671754; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 460
Score = 31.1 bits (67), Expect = 0.67
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2
Query: 176 GFSSSVGQRRRPTDIVNNSTWQRRRTPSSN 87
GF S+G+ R + ++STWQ+++ PS +
Sbjct: 372 GFEGSIGELYRGGSVYSDSTWQQQQLPSQS 401
>At5g55550.2 68418.m06921 RNA recognition motif (RRM)-containing
protein similar to DAZ associated protein 1 [Homo
sapiens] GI:8671754; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 460
Score = 31.1 bits (67), Expect = 0.67
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2
Query: 176 GFSSSVGQRRRPTDIVNNSTWQRRRTPSSN 87
GF S+G+ R + ++STWQ+++ PS +
Sbjct: 372 GFEGSIGELYRGGSVYSDSTWQQQQLPSQS 401
>At5g55550.1 68418.m06920 RNA recognition motif (RRM)-containing
protein similar to DAZ associated protein 1 [Homo
sapiens] GI:8671754; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 448
Score = 31.1 bits (67), Expect = 0.67
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2
Query: 176 GFSSSVGQRRRPTDIVNNSTWQRRRTPSSN 87
GF S+G+ R + ++STWQ+++ PS +
Sbjct: 372 GFEGSIGELYRGGSVYSDSTWQQQQLPSQS 401
>At5g05050.1 68418.m00536 peptidase C1A papain family protein weak
similarity to berghepain-2 [Plasmodium berghei]
GI:17978639; contains Pfam profile PF00112: Papain
family cysteine protease
Length = 299
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 549 GVDYWXREELVGPLWGELGYIKMIRNKNNRCGIAS 445
G YW + G WGE G K+IR + + G +S
Sbjct: 232 GEHYWLIQNSYGEAWGEKGIGKIIRKCSLKNGESS 266
>At1g20740.1 68414.m02598 expressed protein ; expression supported
by MPSS
Length = 266
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -3
Query: 331 IMYD*VKKLYENLRLLSLYFISLKI 257
IMYD VK YE++ L S++F+ +KI
Sbjct: 198 IMYDPVKA-YESVLLSSIFFVDMKI 221
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,127,115
Number of Sequences: 28952
Number of extensions: 191208
Number of successful extensions: 507
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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