Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0465.Seq
(515 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 94 3e-19
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 94 3e-19
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 94 3e-19
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 94 3e-19
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 94 3e-19
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 94 3e-19
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 94 3e-19
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 94 3e-19
AJ404607-1|CAB94913.2| 264|Homo sapiens hypothetical protein pr... 35 0.19
AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ... 31 1.8
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro... 31 1.8
AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein. 31 1.8
BT007364-1|AAP36028.1| 299|Homo sapiens cone-rod homeobox protein. 29 7.3
BC053672-1|AAH53672.1| 299|Homo sapiens CRX protein protein. 29 7.3
BC016664-1|AAH16664.1| 299|Homo sapiens CRX protein protein. 29 7.3
AF024711-1|AAB88418.1| 299|Homo sapiens cone rod homeobox prote... 29 7.3
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 29 9.7
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 93.9 bits (223), Expect = 3e-19
Identities = 43/68 (63%), Positives = 57/68 (83%)
Frame = +2
Query: 50 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 229
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 230 KLSSMPVG 253
KL+S+P G
Sbjct: 61 KLASVPAG 68
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 93.9 bits (223), Expect = 3e-19
Identities = 43/68 (63%), Positives = 57/68 (83%)
Frame = +2
Query: 50 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 229
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 230 KLSSMPVG 253
KL+S+P G
Sbjct: 61 KLASVPAG 68
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 93.9 bits (223), Expect = 3e-19
Identities = 43/68 (63%), Positives = 57/68 (83%)
Frame = +2
Query: 50 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 229
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 230 KLSSMPVG 253
KL+S+P G
Sbjct: 61 KLASVPAG 68
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 93.9 bits (223), Expect = 3e-19
Identities = 43/68 (63%), Positives = 57/68 (83%)
Frame = +2
Query: 50 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 229
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 230 KLSSMPVG 253
KL+S+P G
Sbjct: 61 KLASVPAG 68
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 93.9 bits (223), Expect = 3e-19
Identities = 43/68 (63%), Positives = 57/68 (83%)
Frame = +2
Query: 50 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 229
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 230 KLSSMPVG 253
KL+S+P G
Sbjct: 61 KLASVPAG 68
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 93.9 bits (223), Expect = 3e-19
Identities = 43/68 (63%), Positives = 57/68 (83%)
Frame = +2
Query: 50 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 229
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 230 KLSSMPVG 253
KL+S+P G
Sbjct: 61 KLASVPAG 68
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 93.9 bits (223), Expect = 3e-19
Identities = 43/68 (63%), Positives = 57/68 (83%)
Frame = +2
Query: 50 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 229
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 230 KLSSMPVG 253
KL+S+P G
Sbjct: 61 KLASVPAG 68
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 93.9 bits (223), Expect = 3e-19
Identities = 43/68 (63%), Positives = 57/68 (83%)
Frame = +2
Query: 50 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 229
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 230 KLSSMPVG 253
KL+S+P G
Sbjct: 61 KLASVPAG 68
>AJ404607-1|CAB94913.2| 264|Homo sapiens hypothetical protein
protein.
Length = 264
Score = 34.7 bits (76), Expect = 0.19
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +3
Query: 96 PRQLPLTLRRS-----SAPSVSKLTVRSLRK*SLSSTARMLNNLLRPDVRSCRQC 245
P QLPL+LRR S PS S +RSL S +S++R + RSC +C
Sbjct: 66 PAQLPLSLRRRCSRPRSRPSSSSRAIRSLWSRSRTSSSRWFTSDTSSSSRSCSRC 120
>AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens
cDNA FLJ44709 fis, clone BRACE3019570, highly similar
to Rattus norvegicus SNAP-25-interacting protein (SNIP).
).
Length = 1012
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 89 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 247
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 765 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 818
>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting protein
protein.
Length = 1183
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 89 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 247
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 893 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 946
>AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein.
Length = 762
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 89 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 247
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 472 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 525
>BT007364-1|AAP36028.1| 299|Homo sapiens cone-rod homeobox protein.
Length = 299
Score = 29.5 bits (63), Expect = 7.3
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -3
Query: 261 CSAPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPS 82
C P GI DS+S P + + P ++V T +SP++ P + A+G P
Sbjct: 132 CPDPLGISDSYSPP--LPGPSGSPTTAVATVSIWSPASESPLPEAQRAGLVASG---PSL 186
Query: 81 TASKYAAT 58
T++ YA T
Sbjct: 187 TSAPYAMT 194
>BC053672-1|AAH53672.1| 299|Homo sapiens CRX protein protein.
Length = 299
Score = 29.5 bits (63), Expect = 7.3
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -3
Query: 261 CSAPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPS 82
C P GI DS+S P + + P ++V T +SP++ P + A+G P
Sbjct: 132 CPDPLGISDSYSPP--LPGPSGSPTTAVATVSIWSPASESPLPEAQRAGLVASG---PSL 186
Query: 81 TASKYAAT 58
T++ YA T
Sbjct: 187 TSAPYAMT 194
>BC016664-1|AAH16664.1| 299|Homo sapiens CRX protein protein.
Length = 299
Score = 29.5 bits (63), Expect = 7.3
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -3
Query: 261 CSAPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPS 82
C P GI DS+S P + + P ++V T +SP++ P + A+G P
Sbjct: 132 CPDPLGISDSYSPP--LPGPSGSPTTAVATVSIWSPASESPLPEAQRAGLVASG---PSL 186
Query: 81 TASKYAAT 58
T++ YA T
Sbjct: 187 TSAPYAMT 194
>AF024711-1|AAB88418.1| 299|Homo sapiens cone rod homeobox protein
protein.
Length = 299
Score = 29.5 bits (63), Expect = 7.3
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -3
Query: 261 CSAPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPS 82
C P GI DS+S P + + P ++V T +SP++ P + A+G P
Sbjct: 132 CPDPLGISDSYSPP--LPGPSGSPTTAVATVSIWSPASESPLPEAQRAGLVASG---PSL 186
Query: 81 TASKYAAT 58
T++ YA T
Sbjct: 187 TSAPYAMT 194
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 29.1 bits (62), Expect = 9.7
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -3
Query: 258 SAPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSA-AAGVVLPPS 82
SAPT S + IS T+ +S+ T + SP+ S + +TSA + P
Sbjct: 384 SAPTSSTTSAPTSSTISARTTSIISAPTTSTTSSPTTSTTSATTTSTTSAPTSSTTSTPQ 443
Query: 81 TASKYAAT 58
T+ AAT
Sbjct: 444 TSKTSAAT 451
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,590,252
Number of Sequences: 237096
Number of extensions: 694098
Number of successful extensions: 2163
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2155
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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