Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0461.Seq
         (812 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   6.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   6.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.8  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/45 (26%), Positives = 13/45 (28%)
 Frame = +1

Query: 76  CHQNACCNHPSWGRKCXLPDGDLCLQTTC*WYPCDQLASYLGKTC 210
           C     C     G KC  P+G          Y CD      G  C
Sbjct: 347 CQNGGVCTTIHAGHKCTCPEGFYGKNCEFSGYDCDSNPCQNGGVC 391



 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +1

Query: 76  CHQNACCNHPSWGRKCXLPDG 138
           CH N  C     G +C  P G
Sbjct: 269 CHNNGTCLDKVGGFECKCPPG 289


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -3

Query: 729 RSNYFWFSWYHSLFPWLVVH 670
           +S+YF+FS+Y + +  L V+
Sbjct: 52  KSDYFYFSFYITSYTLLSVY 71


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -3

Query: 729 RSNYFWFSWYHSLFPWLVVH 670
           +S+YF+FS+Y + +  L V+
Sbjct: 52  KSDYFYFSFYITSYTLLSVY 71


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 471 SNHRNVDI*SFSNGLMVLCRVQYNQETRFT 382
           S  RN++  SF   L++LC +       FT
Sbjct: 268 SKSRNIEGVSFGTNLVILCALWITTLLLFT 297


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 232 YDSTSSQNKFFPG 194
           +DS S QN  FPG
Sbjct: 740 FDSRSRQNSSFPG 752


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,691
Number of Sequences: 336
Number of extensions: 4646
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)