Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0461.Seq
         (812 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   4.8  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   4.8  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    24   4.8  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -3

Query: 729 RSNYFWFSWYHSLFPWLVVHPFHFLQGHGRRTXQXQHPSAG 607
           +S  F+F   +SL   L+   FH +    RR    QH   G
Sbjct: 453 QSGIFFFGMSNSLINPLIYGAFHLVPIRQRRNQYNQHVREG 493


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -3

Query: 729 RSNYFWFSWYHSLFPWLVVHPFHFLQGHGRRTXQXQHPSAG 607
           +S  F+F   +SL   L+   FH +    RR    QH   G
Sbjct: 454 QSGIFFFGMSNSLINPLIYGAFHLVPIRQRRNQYNQHVREG 494


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +2

Query: 11  VVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTH--VIN 184
           +VT+++  +  G+D+LA  +EDV + L        E       T +++RR DGT    + 
Sbjct: 202 IVTEMAEVLITGIDMLA-KKEDVERGL----QRALERTAVAATTSLWERR-DGTQRARVR 255

Query: 185 LRRTWEKLVLAARAVV 232
           L R    L+L  R VV
Sbjct: 256 LPRRDTDLLLDKRIVV 271


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 884,261
Number of Sequences: 2352
Number of extensions: 19435
Number of successful extensions: 40
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)