Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0460.Seq
         (889 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VJ25 Cluster: CG15168-PA; n=8; Endopterygota|Rep: CG1...    78   3e-13
UniRef50_A7RYN2 Cluster: Predicted protein; n=1; Nematostella ve...    68   3e-10
UniRef50_Q09JH7 Cluster: Transmembrane protein; n=2; Arthropoda|...    66   1e-09
UniRef50_Q8K273 Cluster: Transmembrane protein 32 precursor; n=1...    62   1e-08
UniRef50_Q8N4V1 Cluster: Transmembrane protein 32 precursor; n=9...    62   1e-08
UniRef50_Q555V5 Cluster: Putative uncharacterized protein; n=2; ...    51   3e-05
UniRef50_Q17477 Cluster: Putative uncharacterized protein; n=2; ...    45   0.003
UniRef50_Q2HIM5 Cluster: At5g03345; n=7; Magnoliophyta|Rep: At5g...    38   0.34 
UniRef50_Q5KIM9 Cluster: Putative uncharacterized protein; n=1; ...    37   0.79 
UniRef50_Q6PV99 Cluster: Gonadotropin I beta subunit; n=3; Acipe...    35   3.2  
UniRef50_Q0EW21 Cluster: Putative uncharacterized protein; n=1; ...    34   5.6  

>UniRef50_Q9VJ25 Cluster: CG15168-PA; n=8; Endopterygota|Rep:
           CG15168-PA - Drosophila melanogaster (Fruit fly)
          Length = 109

 Score = 77.8 bits (183), Expect = 3e-13
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = +3

Query: 255 LPLDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 434
           LPLDI++Q V+SL  V++ ++ + GN +EI A  ++    W+T  N PSFY FNHRG+AL
Sbjct: 42  LPLDIILQTVISLVIVIYNIIEIVGNFKEIRATVDMQQKTWDTLGNFPSFYSFNHRGRAL 101

Query: 435 SYDYVP 452
           +  Y P
Sbjct: 102 NPGYTP 107



 Score = 48.8 bits (111), Expect = 2e-04
 Identities = 20/36 (55%), Positives = 28/36 (77%)
 Frame = +1

Query: 148 FHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTT 255
           F+K+++I GF SL H AFSA  HR+YLR+T QE+ +
Sbjct: 6   FNKLLLIAGFASLAHAAFSAAHHRTYLRLTEQEWNS 41


>UniRef50_A7RYN2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 109

 Score = 68.1 bits (159), Expect = 3e-10
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = +3

Query: 255 LPLDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 434
           LPLDI IQ V+ +     GV+ VAG  +EI AAAE+ +  WE+  N PSFY FNHRG+A+
Sbjct: 40  LPLDIYIQCVLGMLLGCVGVVLVAGEFKEIKAAAEMASKTWESLGNRPSFYTFNHRGRAM 99



 Score = 33.9 bits (74), Expect = 5.6
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 154 KVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTT 255
           +V+V  G L++ H  +SA Q R+Y ++  +EF +
Sbjct: 6   RVLVFFGVLAILHAGYSAVQCRTYYKLLEEEFVS 39


>UniRef50_Q09JH7 Cluster: Transmembrane protein; n=2;
           Arthropoda|Rep: Transmembrane protein - Argas
           monolakensis
          Length = 103

 Score = 66.1 bits (154), Expect = 1e-09
 Identities = 29/61 (47%), Positives = 42/61 (68%)
 Frame = +3

Query: 255 LPLDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 434
           LPLD+++Q+V  L   M+GV+ +AG+ +E+ A  EL    +ET  N PSFY F HRG+AL
Sbjct: 41  LPLDVILQSVFCLLLTMYGVVCIAGDFKEVRATVELETKTFETFGNRPSFYTFCHRGRAL 100

Query: 435 S 437
           +
Sbjct: 101 A 101



 Score = 46.4 bits (105), Expect = 0.001
 Identities = 19/33 (57%), Positives = 25/33 (75%)
 Frame = +1

Query: 154 KVIVIIGFLSLFHTAFSATQHRSYLRITSQEFT 252
           K++V +G + L H A SA QHRSYLR+T Q+FT
Sbjct: 7   KLMVTLGVVGLIHAAISAAQHRSYLRLTEQDFT 39


>UniRef50_Q8K273 Cluster: Transmembrane protein 32 precursor; n=17;
           Euteleostomi|Rep: Transmembrane protein 32 precursor -
           Mus musculus (Mouse)
          Length = 131

 Score = 62.5 bits (145), Expect = 1e-08
 Identities = 24/60 (40%), Positives = 42/60 (70%)
 Frame = +3

Query: 255 LPLDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 434
           LP+DIV+Q +++     +G++++AG  +++ A +EL    ++T  N PSFY+FNHRG+ L
Sbjct: 41  LPIDIVLQTLLAFAVTCYGIVHIAGEFKDMDATSELKNKTFDTLRNHPSFYVFNHRGRVL 100



 Score = 41.5 bits (93), Expect = 0.028
 Identities = 18/34 (52%), Positives = 24/34 (70%)
 Frame = +1

Query: 145 SFHKVIVIIGFLSLFHTAFSATQHRSYLRITSQE 246
           S  K +V +G  +L H AFSA QHRSY+R+T +E
Sbjct: 4   SLWKGLVGVGLFALAHAAFSAAQHRSYMRLTEKE 37


>UniRef50_Q8N4V1 Cluster: Transmembrane protein 32 precursor; n=9;
           Amniota|Rep: Transmembrane protein 32 precursor - Homo
           sapiens (Human)
          Length = 131

 Score = 62.5 bits (145), Expect = 1e-08
 Identities = 24/60 (40%), Positives = 42/60 (70%)
 Frame = +3

Query: 255 LPLDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 434
           LP+DIV+Q +++     +G++++AG  +++ A +EL    ++T  N PSFY+FNHRG+ L
Sbjct: 41  LPIDIVLQTLLAFAVTCYGIVHIAGEFKDMDATSELKNKTFDTLRNHPSFYVFNHRGRVL 100



 Score = 41.9 bits (94), Expect = 0.021
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = +1

Query: 145 SFHKVIVIIGFLSLFHTAFSATQHRSYLRITSQE 246
           S  K +V IG  +L H AFSA QHRSY+R+T +E
Sbjct: 4   SLWKGLVGIGLFALAHAAFSAAQHRSYMRLTEKE 37


>UniRef50_Q555V5 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 105

 Score = 51.2 bits (117), Expect = 3e-05
 Identities = 23/61 (37%), Positives = 39/61 (63%)
 Frame = +3

Query: 255 LPLDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 434
           +P DIV++ ++SLF   WG++N +  L  I A+  L    +++ +  P+F +FNHRGK L
Sbjct: 41  VPFDIVVECIISLFLFAWGIIN-SQFLIPIKASTHLAKKSFDSYDYRPNFTVFNHRGKYL 99

Query: 435 S 437
           +
Sbjct: 100 N 100



 Score = 40.3 bits (90), Expect = 0.064
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +1

Query: 154 KVIVIIGFLSLFHTAFSATQHRSYLRITSQEF 249
           K+  +IG     HT +SA QHR YLR+T Q F
Sbjct: 7   KIFCVIGISIFLHTVYSALQHRKYLRLTDQPF 38


>UniRef50_Q17477 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 500

 Score = 44.8 bits (101), Expect = 0.003
 Identities = 18/36 (50%), Positives = 26/36 (72%)
 Frame = +1

Query: 142 ASFHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEF 249
           ++ +++I I+  LSL H A+SA QHR YLR+T Q F
Sbjct: 3   STIYRLITIVSLLSLLHCAYSAAQHRFYLRLTEQPF 38


>UniRef50_Q2HIM5 Cluster: At5g03345; n=7; Magnoliophyta|Rep:
           At5g03345 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 104

 Score = 37.9 bits (84), Expect = 0.34
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
 Frame = +3

Query: 192 YSFLSYTTSI-IFEDHVTRVYHLPLDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNA 368
           YS + Y   + I E+  +R    P++++++ ++ L   MW  L   G    I   ++ N 
Sbjct: 20  YSTIQYRGLLKIMEEEFSRP---PINVILELIIGLALCMWAALTFPGKFLSIHPDSDENR 76

Query: 369 IKWETQNNLPSFYIFNHRGK 428
             +   N+   F IFNHRG+
Sbjct: 77  AVFLPDNS--DFMIFNHRGR 94


>UniRef50_Q5KIM9 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 154

 Score = 36.7 bits (81), Expect = 0.79
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = +3

Query: 255 LPLDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 434
           LPL IVI+A VSL   + G++   G L+++    EL     +  +    F   + RGKA+
Sbjct: 89  LPLSIVIEAFVSLICFIIGIVYATGELKDVTYRGELAHRTIDDSDARMGFMKLSKRGKAI 148

Query: 435 SYD 443
             D
Sbjct: 149 FGD 151


>UniRef50_Q6PV99 Cluster: Gonadotropin I beta subunit; n=3;
           Acipenser|Rep: Gonadotropin I beta subunit - Acipenser
           schrenckii (Amur sturgeon)
          Length = 128

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +2

Query: 263 GYCHPSCG-QFVCCHVGSVECGG*SSRNTSCC*IKCYQMGDTEQSSLILYLQ 415
           G CH SC  + +   +    CG   S NT+ C  +C    D  +SS+ LY Q
Sbjct: 16  GQCHASCALENITIGIEKDGCGNCVSVNTTSCAGRCLTQADVYKSSISLYTQ 67


>UniRef50_Q0EW21 Cluster: Putative uncharacterized protein; n=1;
           Mariprofundus ferrooxydans PV-1|Rep: Putative
           uncharacterized protein - Mariprofundus ferrooxydans
           PV-1
          Length = 198

 Score = 33.9 bits (74), Expect = 5.6
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 165 DHWFSFVIPYSFLSYTTSIIFED-HVTRVYHLPLDI 269
           D +F F+ PYS+L+ T   +FE  H  RV  LP+++
Sbjct: 6   DFYFDFISPYSYLASTRMPLFEQAHAVRVNWLPVNL 41


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,902,893
Number of Sequences: 1657284
Number of extensions: 13887068
Number of successful extensions: 29720
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29692
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)