Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0460.Seq
         (889 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071004-1|AAL48626.1|  109|Drosophila melanogaster RE09053p pro...    78   2e-14
AE014134-3007|AAF53732.1|  109|Drosophila melanogaster CG15168-P...    78   2e-14
AE014298-1069|AAF46280.1| 1767|Drosophila melanogaster CG15327-P...    30   4.9  

>AY071004-1|AAL48626.1|  109|Drosophila melanogaster RE09053p
           protein.
          Length = 109

 Score = 77.8 bits (183), Expect = 2e-14
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = +3

Query: 255 LPLDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 434
           LPLDI++Q V+SL  V++ ++ + GN +EI A  ++    W+T  N PSFY FNHRG+AL
Sbjct: 42  LPLDIILQTVISLVIVIYNIIEIVGNFKEIRATVDMQQKTWDTLGNFPSFYSFNHRGRAL 101

Query: 435 SYDYVP 452
           +  Y P
Sbjct: 102 NPGYTP 107



 Score = 48.8 bits (111), Expect = 1e-05
 Identities = 20/36 (55%), Positives = 28/36 (77%)
 Frame = +1

Query: 148 FHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTT 255
           F+K+++I GF SL H AFSA  HR+YLR+T QE+ +
Sbjct: 6   FNKLLLIAGFASLAHAAFSAAHHRTYLRLTEQEWNS 41


>AE014134-3007|AAF53732.1|  109|Drosophila melanogaster CG15168-PA
           protein.
          Length = 109

 Score = 77.8 bits (183), Expect = 2e-14
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = +3

Query: 255 LPLDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 434
           LPLDI++Q V+SL  V++ ++ + GN +EI A  ++    W+T  N PSFY FNHRG+AL
Sbjct: 42  LPLDIILQTVISLVIVIYNIIEIVGNFKEIRATVDMQQKTWDTLGNFPSFYSFNHRGRAL 101

Query: 435 SYDYVP 452
           +  Y P
Sbjct: 102 NPGYTP 107



 Score = 48.8 bits (111), Expect = 1e-05
 Identities = 20/36 (55%), Positives = 28/36 (77%)
 Frame = +1

Query: 148 FHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTT 255
           F+K+++I GF SL H AFSA  HR+YLR+T QE+ +
Sbjct: 6   FNKLLLIAGFASLAHAAFSAAHHRTYLRLTEQEWNS 41


>AE014298-1069|AAF46280.1| 1767|Drosophila melanogaster CG15327-PA
            protein.
          Length = 1767

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 390  NLPSFYIFNHRGKALSYDYVPTPTKAD 470
            N+ SF IF H  + L++D +PT T  D
Sbjct: 1678 NMRSFGIFQHHSQILAWDNLPTTTDTD 1704


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,966,493
Number of Sequences: 53049
Number of extensions: 656604
Number of successful extensions: 1493
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)