Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0453.Seq
         (912 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.4  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   3.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.3  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 229 SKTFIGSRHGLAVL 270
           +KTF G+RHGL  L
Sbjct: 196 AKTFFGARHGLETL 209


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 590 QIIERRTQEIVEWLPLHPAHGLVDNFYG 507
           +I+ +  QEI EWL      G  D F G
Sbjct: 527 KILSQAKQEIPEWLGSKSYGGSADQFGG 554


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 674 SQRNLLXVFLLYLTSFDSXILRFNLR 597
           ++R++   FLL L  FDS +   N++
Sbjct: 373 TKRDMFVEFLLKLVDFDSKLQTMNIK 398


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 674 SQRNLLXVFLLYLTSFDSXILRFNLR 597
           ++R++   FLL L  FDS +   N++
Sbjct: 98  TKRDMFVEFLLKLVDFDSKLQTMNIK 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,228
Number of Sequences: 336
Number of extensions: 4519
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25444518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)