Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0450.Seq
         (886 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    37   2e-04
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    31   0.016
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    31   0.016
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   5.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.6  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 37.1 bits (82), Expect = 2e-04
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 1   LLQDFFNGKELNKSINPDE 57
           L++DFF+GKELN+ INPDE
Sbjct: 176 LIKDFFDGKELNRGINPDE 194


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 30.7 bits (66), Expect = 0.016
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 1   LLQDFFNGKELNKSINPDE 57
           L+ ++FNGKE  +SINPDE
Sbjct: 177 LITEYFNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 30.7 bits (66), Expect = 0.016
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 1   LLQDFFNGKELNKSINPDE 57
           L+ ++FNGKE  +SINPDE
Sbjct: 177 LITEYFNGKEPCRSINPDE 195


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
          protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 1  LLQDFFNGKELNKSINPDE 57
          +  DF NGK L++S   D+
Sbjct: 15 IFSDFVNGKTLHRSTRDDK 33


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 330 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEKSTNK 446
           +   G+  A   V  I+   D+D NG  N +  +K+  K
Sbjct: 56  YSFIGVNDADWSVLVIDPELDVDQNGFRNFTNLKKTHPK 94


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 587 RFQCILGPGWSPFAC 543
           ++QC+ G GW+   C
Sbjct: 120 QYQCLCGVGWTGKVC 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,847
Number of Sequences: 336
Number of extensions: 3360
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)