Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0450.Seq
(886 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 168 5e-42
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 1e-40
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 155 3e-38
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 132 4e-31
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 5e-24
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 40 0.002
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 30 2.2
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_29552| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_10182| Best HMM Match : Transformer (HMM E-Value=9.9) 30 2.9
SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) 30 2.9
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 30 2.9
SB_6220| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0089) 30 2.9
SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 29 5.0
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 29 5.0
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_5000| Best HMM Match : EGF_CA (HMM E-Value=0) 29 6.6
SB_39065| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 28 8.7
SB_5366| Best HMM Match : LRR_1 (HMM E-Value=0.00075) 28 8.7
SB_25665| Best HMM Match : TolA (HMM E-Value=1.7) 28 8.7
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 168 bits (409), Expect = 5e-42
Identities = 83/112 (74%), Positives = 91/112 (81%)
Frame = +3
Query: 255 NQPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEK 434
NQPGVLIQVFEGER+ T NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA +K
Sbjct: 436 NQPGVLIQVFEGERSMTAHNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDK 495
Query: 435 STNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALESY 590
ST KENKITI NDKGRLSKE+IERM+ + +R + KN+LESY
Sbjct: 496 STGKENKITITNDKGRLSKEDIERMVNEASKYKEEDEKQRDRIQTKNSLESY 547
Score = 74.5 bits (175), Expect = 1e-13
Identities = 37/69 (53%), Positives = 42/69 (60%)
Frame = +1
Query: 1 LLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 180
+LQ+ F GKELNKSINPDE ILHGDK + V+D GIETAGG
Sbjct: 351 MLQELFGGKELNKSINPDEAVAYGAAVQAAILHGDKDDTVKDLLLLDVAPLSMGIETAGG 410
Query: 181 VMTTLIKRN 207
VM+ LIKRN
Sbjct: 411 VMSVLIKRN 419
Score = 31.5 bits (68), Expect = 0.94
Identities = 12/18 (66%), Positives = 18/18 (100%)
Frame = +1
Query: 595 FSMKSTMEDEKLKEKISD 648
+SMKST+ED+K+K+KIS+
Sbjct: 549 YSMKSTVEDDKVKDKISE 566
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 163 bits (397), Expect = 1e-40
Identities = 78/112 (69%), Positives = 92/112 (82%)
Frame = +3
Query: 255 NQPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEK 434
NQ VLIQV+EGER+ TKDNNLLGKFEL+GIPPAPRGVPQI+VTFD+D+NGILNVSA +K
Sbjct: 528 NQTSVLIQVYEGERSLTKDNNLLGKFELSGIPPAPRGVPQIDVTFDVDSNGILNVSAVDK 587
Query: 435 STNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALESY 590
ST KENKITI NDKGRLSKE+IERM+ + + R ++KN+LESY
Sbjct: 588 STGKENKITITNDKGRLSKEDIERMVKEAEKFKAADEAVRERIQSKNSLESY 639
Score = 81.4 bits (192), Expect = 9e-16
Identities = 41/69 (59%), Positives = 43/69 (62%)
Frame = +1
Query: 1 LLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 180
LLQ+FFNGKELNKSINPDE ILHGDKSE QD G+ETAGG
Sbjct: 443 LLQNFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEATQDLLLLDVAPLTLGLETAGG 502
Query: 181 VMTTLIKRN 207
VMT IKRN
Sbjct: 503 VMTAAIKRN 511
Score = 34.7 bits (76), Expect = 0.10
Identities = 14/18 (77%), Positives = 18/18 (100%)
Frame = +1
Query: 595 FSMKSTMEDEKLKEKISD 648
FSMKSTMEDEK+K+K+S+
Sbjct: 641 FSMKSTMEDEKVKDKLSE 658
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 155 bits (377), Expect = 3e-38
Identities = 76/112 (67%), Positives = 87/112 (77%)
Frame = +3
Query: 255 NQPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEK 434
NQP V I+VFEGER TK NNLLGKF+L+GIPPAPRGVPQIEVTFDIDANGILNVSA +K
Sbjct: 435 NQPAVTIRVFEGERPLTKHNNLLGKFDLSGIPPAPRGVPQIEVTFDIDANGILNVSAKDK 494
Query: 435 STNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALESY 590
ST K ITI NDKGRLSKEEI+RM+ ++ ++R A+N LESY
Sbjct: 495 STGKTGSITITNDKGRLSKEEIDRMINDAEKYKSEDEAQREKIAARNRLESY 546
Score = 69.7 bits (163), Expect = 3e-12
Identities = 35/69 (50%), Positives = 43/69 (62%)
Frame = +1
Query: 1 LLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 180
+L+++F+GK LNKSINPDE IL GDKS+EV+D GIETAG
Sbjct: 350 MLEEYFSGKSLNKSINPDEAVAYGAAVQAAILSGDKSDEVKDVLLVDVAPLSLGIETAGE 409
Query: 181 VMTTLIKRN 207
VMT LI+RN
Sbjct: 410 VMTKLIERN 418
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 132 bits (319), Expect = 4e-31
Identities = 66/112 (58%), Positives = 77/112 (68%)
Frame = +3
Query: 255 NQPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEK 434
NQ V IQVFEGER TKDN+ LGKF+L GIPPAPRGVPQIEVTF+ID NGIL VSA +K
Sbjct: 1129 NQNTVTIQVFEGERPMTKDNHPLGKFDLNGIPPAPRGVPQIEVTFEIDVNGILRVSAEDK 1188
Query: 435 STNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALESY 590
T + KITI ND+ RL+ E+IERM+ + A+N LESY
Sbjct: 1189 GTGNKEKITITNDQNRLTPEDIERMVNDAEKFADEDKKTKEKVEARNELESY 1240
Score = 51.2 bits (117), Expect = 1e-06
Identities = 28/69 (40%), Positives = 36/69 (52%)
Frame = +1
Query: 1 LLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 180
L++DFF GKE ++ INPDE +L G+ E+ + GIET GG
Sbjct: 1046 LVKDFFEGKEPSRGINPDEAVAYGAAVQAGVLGGE--EDTGEVVLLDVNPLTLGIETVGG 1103
Query: 181 VMTTLIKRN 207
VMT LI RN
Sbjct: 1104 VMTKLISRN 1112
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 108 bits (260), Expect = 5e-24
Identities = 53/85 (62%), Positives = 64/85 (75%)
Frame = +3
Query: 258 QPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEKS 437
Q V I+VF+GER DN LLG+F+L GIPPAPRGVPQ+EVTFDIDANGI+NVSA +K
Sbjct: 241 QTQVEIKVFQGEREMAIDNKLLGQFQLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDKG 300
Query: 438 TNKENKITIXNDKGRLSKEEIERML 512
T +E +I I G LSK+ IE M+
Sbjct: 301 TGREQQIVI-QSSGGLSKDAIENMI 324
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +1
Query: 4 LQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGV 183
+QD F G+ +K++NPDE +L GD V+D GIET GGV
Sbjct: 161 VQDIF-GRVPSKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGV 215
Query: 184 MTTLIKRN 207
T LI RN
Sbjct: 216 FTKLITRN 223
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +1
Query: 4 LQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGV 183
+QD F G+ +K++NPDE +L GD V+D GIET GGV
Sbjct: 106 VQDIF-GRVPSKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGV 160
Query: 184 MTTLIKRN 207
T LI RN
Sbjct: 161 FTKLITRN 168
Score = 32.3 bits (70), Expect = 0.54
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 258 QPGVLIQVFEGERAXTKDNNLLGKFEL 338
Q V I+VF+GER DN LLG+F+L
Sbjct: 186 QTQVEIKVFQGEREMAIDNKLLGQFQL 212
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 36.3 bits (80), Expect = 0.033
Identities = 14/64 (21%), Positives = 33/64 (51%)
Frame = +2
Query: 383 HLRHRCQRYPQRFRYXEVHQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKETI 562
H +H+ ++ Q+ +Y + HQ Q H Q+Q+ Q + + + ++ + + +Q +
Sbjct: 291 HQQHQLHQHQQQHQYQQQHQHQHQHQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQQQ 350
Query: 563 QGQE 574
Q Q+
Sbjct: 351 QQQQ 354
>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 32.3 bits (70), Expect = 0.54
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 444 KENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALESYWLQHEV 608
KE + +K R KEE ER+ ++R E R+ KR+ + +ES L E+
Sbjct: 209 KEERRRKREEKRRKKKEEQERLEQQRRQREQRIAEKRKRLEEQRKVESLHLLKEL 263
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = +2
Query: 395 RCQRYPQRFRYXEVHQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKETIQGQE 574
RC+R ++ R E ++ E++ +R+R + R+R E E+ R E ++++E + +E
Sbjct: 203 RCERQREKERERERERERERERERERERERERERERERERERERER-ERERERERERERE 261
>SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +2
Query: 383 HLRHRCQRYPQRFRYXEVHQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKE 556
+++H + +R+ E ++GE+D +R+R + RDR + E+ R E D++++
Sbjct: 110 NVKHSGRVDSERYEDREDRERGERDRDRRRERDRGE-RDRGERDRGERDRGERDRRRD 166
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 389 RHRCQRYPQRFRYXEVHQQGEQDH-HXQRQRSSLQGRDRAYVNEAEKYRNEDDKQK 553
R R R ++ R E + ++D H R R + +DR Y + +K R ED++ +
Sbjct: 179 RRRRSRSREKDREGEKPRDRDRDRRHRDRDRDKERDKDRDYHRDNDKVRQEDEEME 234
>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
Length = 273
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 162 TEGKGCYIKQQQILHLLRLVTVQDSSLDSCTISYGLVRVNRFVELLSIKEIL 7
T G I+QQQ LRLVT Q + ++ + L ++ FV LL K ++
Sbjct: 9 TAGAAVAIEQQQDSAYLRLVTPQRTETETYVVLCNLRQLQTFVSLLIAKYLI 60
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 401 QRYPQRFRYXEVHQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKETIQGQ 571
QR QR R + +Q ++ H QRQR + R R + ++ R +++ Q Q
Sbjct: 28 QRQRQRQRQRQRQRQRQRQRHRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQ 84
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 401 QRYPQRFRYXEVHQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYR-NEDDKQKETIQGQE 574
QR QR R + H+Q ++ QRQR + R R + ++ R + +Q++ ++ ++
Sbjct: 36 QRQRQRQRQRQRHRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRLRQRQ 94
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 401 QRYPQRFRYXEVHQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKE 556
QR QR R + +Q ++ QRQR + R R + ++ RN++D +
Sbjct: 64 QRQRQRQRQRQRQRQRQRQRQRQRQRLRQRQRLRQRQRQRQQQRNDNDNDND 115
>SB_29552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +3
Query: 279 VFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEKSTNKENK 455
+FE + + + + G EL PPA V ++E +F+ +G+++ + S+ +E K
Sbjct: 125 IFEPRESVPRQSQVPGAMELLPPPPAVFNVNEVETSFEELKSGLMSSGNSDMSSLEELK 183
>SB_10182| Best HMM Match : Transformer (HMM E-Value=9.9)
Length = 245
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = +2
Query: 416 RFRYXEVHQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKETI 562
R R + H++ ++D R R + RD+ + ++ R++DD+Q++ +
Sbjct: 92 RERDEDGHRKRDRDRRDDRDRRGERNRDKDKDHRGDRKRSDDDRQEKRL 140
>SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)
Length = 1222
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = -2
Query: 216 DGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSL 82
DG+V LDE + +++SL++ G C + ++ + + TV++SSL
Sbjct: 1160 DGAVLLDEWNYGSNASLSSCGSTC--SESRLSYFIGQDTVEESSL 1202
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 413 QRFRYXEVHQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQK 553
+R R E ++GE+ + ++ + +R V EAE+ R ED++Q+
Sbjct: 393 ERERQEEERRKGEERQRQEEEKRQKEEEERLRV-EAERQREEDERQR 438
>SB_6220| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0089)
Length = 374
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 407 YPQRFRYXEVHQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKE---TIQGQE 574
Y + + Q+ H +++ SSLQ R + EK + E +QKE T+QG++
Sbjct: 65 YTYQIHAKKAEQEVNVQHVVEKETSSLQSRIEELQSRMEKLKRELKRQKEKESTLQGEK 123
>SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 581 QCILGPGWSPFACHPRFCTSLPH 513
+CI PGWS CH C P+
Sbjct: 1444 KCICDPGWSGIGCHITDCPGTPN 1466
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 395 RCQRYPQRFRYXEVHQQGEQDHHXQRQRSSLQGRDRAYVNEAEKY---RNEDDK 547
R QRY + + E HQ+G HH R S + RD NE ++Y R++ DK
Sbjct: 134 RDQRY-RDYEDRERHQRGRDRHHRDRDDSGCRFRD----NEGKRYSDLRHDGDK 182
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +2
Query: 422 RYXEVHQQGEQ-----DHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKE 556
RY ++ G++ D+ +R R + GRDR+Y + + R E + + E
Sbjct: 172 RYSDLRHDGDKIYRDRDNEGKRNRDASDGRDRSYRDRDRRSREEREPRPE 221
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 437 HQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKETIQGQE 574
HQQ E++ +R+R+ + R + E EK + K KE + +E
Sbjct: 900 HQQEEREKDMERERTEEKARIMKEIEEKEKKEEAERKAKEEKEREE 945
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = +2
Query: 440 QQGEQD-----HHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKETIQGQ 571
QQG QD H + Q+S ++ R+ + K+ NE+ +E +QGQ
Sbjct: 861 QQGTQDLVASNEHSKSQQSEIESL-RSQIESLNKFYNENQSAEEKLQGQ 908
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 389 RHRCQRYPQRFRYXEVHQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKETIQG 568
R R Q+ Q + + Q +Q QR+RS QG+ R ++++ + +Q+ IQG
Sbjct: 1739 RQREQQNEQEQQRQQHELQQQQAEQRQRERSQQQGQPR----QSQQNDQQQQQQQGVIQG 1794
Query: 569 QE 574
Q+
Sbjct: 1795 QQ 1796
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 1 LLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEV 120
LL+++F GKE+ + I+PDE IL G K ++
Sbjct: 58 LLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRKEADM 97
>SB_5000| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1050
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 390 DIDANGILNVSAXEKSTNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRA 569
+ID + ILN + E+ T K NDK L ++ M + +T +T K PS
Sbjct: 249 EIDCDSILNATIGEQVTFKVTTSDPNNDKVTLQASQMPEGAM--FNNKTGLTWKPLPSNN 306
Query: 570 KNAL 581
K+A+
Sbjct: 307 KSAM 310
>SB_39065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 437 HQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKETIQGQE 574
HQ+ EQ+ Q+Q+ Q +++ E E+ E ++++E Q QE
Sbjct: 17 HQEQEQEQQQQQQQQEEQEQEQEQEQEQEQ-EQEQEQEQEQEQEQE 61
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 413 QRFRYXEVHQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKETIQGQE 574
Q+ E ++D R R R+R E EK + E DK++E + +E
Sbjct: 596 QKKEEKEESSHSDEDTSRDRNREKENDREREKEREKEKEKEERDKEREKEKEKE 649
>SB_5366| Best HMM Match : LRR_1 (HMM E-Value=0.00075)
Length = 310
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/70 (20%), Positives = 27/70 (38%)
Frame = +2
Query: 353 GAAWRASN*GHLRHRCQRYPQRFRYXEVHQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYR 532
G W + G ++C Y F +++ +H R+R+ R + +
Sbjct: 61 GCLWSQNTQGCRLNQCSIYSAAFSGSQINADSIINHGTGRERNERNARSHRFCPRMQTAL 120
Query: 533 NEDDKQKETI 562
+ DDK T+
Sbjct: 121 SRDDKPVSTV 130
>SB_25665| Best HMM Match : TolA (HMM E-Value=1.7)
Length = 697
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +2
Query: 383 HLRHRCQRYPQRFRYXEVHQQGEQDHHXQ---RQRSSLQGRDRAYVNEAEKYRNEDDKQK 553
HL+ Q+ QR + QQG+Q Q +QR L+ R + ++ + ++ + + +Q+
Sbjct: 231 HLQQHRQQQQQRLDRHQ-QQQGQQQQQQQQRLQQRRQLRERQQRHLQQQQQRQQQFQRQQ 289
Query: 554 ETIQGQE 574
+ Q Q+
Sbjct: 290 QQQQMQQ 296
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,544,299
Number of Sequences: 59808
Number of extensions: 460174
Number of successful extensions: 1624
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1596
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2526446612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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