Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0450.Seq
         (886 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.33 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    27   0.57 
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              26   1.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   3.1  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   5.4  
AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    23   9.4  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 28.3 bits (60), Expect = 0.33
 Identities = 12/51 (23%), Positives = 26/51 (50%)
 Frame = +2

Query: 422 RYXEVHQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKETIQGQE 574
           R  + HQQ +Q    QRQ+   Q + +    + ++ + +  +Q++  Q Q+
Sbjct: 306 RQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQ 356


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 27.5 bits (58), Expect = 0.57
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
 Frame = +2

Query: 437  HQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYRN---EDDKQK---ETIQGQE 574
            HQ  + DH    +  SLQ  D A +     ++N   +D+  K   ET++G+E
Sbjct: 1169 HQDNKLDHELNHRGVSLQDDDTASIKSYGSHKNRPFKDESHKGSAETMEGEE 1220


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 401 QRYPQRFRYXEVHQQGEQDHHXQRQR 478
           QR PQR+      QQ +Q H  Q+Q+
Sbjct: 354 QRQPQRYVVAGSSQQQQQQHQQQQQK 379



 Score = 25.0 bits (52), Expect = 3.1
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = +2

Query: 389 RHRCQRYPQRFRYX-EVHQQGEQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKETIQ 565
           + R Q+  QR +   + HQ+ +Q    QRQ+   Q +   +     + +N   +Q+    
Sbjct: 270 QQREQQQQQRVQQQNQQHQRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQQQQQSNQP 329

Query: 566 GQE 574
            Q+
Sbjct: 330 QQQ 332


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 558  PSRAKNALESYWLQHEVYHG 617
            PSR+++ L S  L H ++HG
Sbjct: 1302 PSRSEDTLNSSHLHHHLHHG 1321


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 386  LRHRCQRYPQRFRYXEVHQQGEQDHHXQRQRS 481
            L+ + Q+  Q+ +  + HQQ +  HH Q Q S
Sbjct: 1308 LQQQQQQQQQQQQQHQQHQQHQLQHHHQPQLS 1339


>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 7/33 (21%), Positives = 19/33 (57%)
 Frame = +3

Query: 357 PRGVPQIEVTFDIDANGILNVSAXEKSTNKENK 455
           P+G  + ++   + ++GIL ++   K   ++N+
Sbjct: 65  PKGHNEADIVSSLSSDGILTITCPRKEIEQKNE 97


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 794,146
Number of Sequences: 2352
Number of extensions: 14172
Number of successful extensions: 49
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)