Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0450.Seq
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 169 3e-42
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 159 2e-39
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 153 2e-37
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 153 2e-37
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 151 6e-37
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 140 2e-33
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 137 9e-33
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 122 3e-28
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 122 3e-28
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 107 8e-24
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 55 6e-08
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 55 6e-08
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 41 0.001
L23651-5|AAU87829.1| 1127|Caenorhabditis elegans Nuclear pore co... 29 3.3
Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z79755-13|CAB02114.1| 819|Caenorhabditis elegans Hypothetical p... 29 5.8
U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 29 5.8
U23413-1|AAA64290.2| 182|Caenorhabditis elegans Hypothetical pr... 29 5.8
U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z68008-3|CAE17909.1| 97|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 169 bits (410), Expect = 3e-42
Identities = 82/112 (73%), Positives = 93/112 (83%)
Frame = +3
Query: 255 NQPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEK 434
NQPGVLIQV+EGERA TKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K
Sbjct: 435 NQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDK 494
Query: 435 STNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALESY 590
ST K+NKITI NDKGRLSK++IERM+ + +++ AKN LESY
Sbjct: 495 STGKQNKITITNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESY 546
Score = 77.8 bits (183), Expect = 1e-14
Identities = 41/69 (59%), Positives = 42/69 (60%)
Frame = +1
Query: 1 LLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 180
LL D F+GKELNKSINPDE IL GDKSE VQD GIETAGG
Sbjct: 350 LLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGG 409
Query: 181 VMTTLIKRN 207
VMT LIKRN
Sbjct: 410 VMTALIKRN 418
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 523 EVQKRG*QAKGDHPGPRMHWNLTGFSMKSTMEDEKLKEKIS 645
E K +A+ D G + F++K T+EDEKLK+KIS
Sbjct: 524 EKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKIS 564
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 159 bits (386), Expect = 2e-39
Identities = 78/112 (69%), Positives = 89/112 (79%)
Frame = +3
Query: 255 NQPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEK 434
NQPGVLIQV+EGERA TKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K
Sbjct: 435 NQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDK 494
Query: 435 STNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALESY 590
ST K +ITI NDK R SK++IERM+ + +++ AKN LESY
Sbjct: 495 STGKAKQITITNDKDRFSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESY 546
Score = 77.8 bits (183), Expect = 1e-14
Identities = 41/69 (59%), Positives = 42/69 (60%)
Frame = +1
Query: 1 LLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 180
LL D F+GKELNKSINPDE IL GDKSE VQD GIETAGG
Sbjct: 350 LLSDLFSGKELNKSINPDEALAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGG 409
Query: 181 VMTTLIKRN 207
VMT LIKRN
Sbjct: 410 VMTALIKRN 418
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 523 EVQKRG*QAKGDHPGPRMHWNLTGFSMKSTMEDEKLKEKIS 645
E K +A+ D G + F++K T+EDEKLK+KIS
Sbjct: 524 EKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKIS 564
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 153 bits (371), Expect = 2e-37
Identities = 73/115 (63%), Positives = 90/115 (78%)
Frame = +3
Query: 255 NQPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEK 434
NQPGV IQV+EGERA T+DN+ LG FEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K
Sbjct: 435 NQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSAEDK 494
Query: 435 STNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALESYWLQ 599
ST K N+ITI N+KGRL++ +I+RM+ + E +R +A+N LE+Y Q
Sbjct: 495 STGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLEAYAFQ 549
Score = 69.3 bits (162), Expect = 3e-12
Identities = 36/69 (52%), Positives = 40/69 (57%)
Frame = +1
Query: 1 LLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 180
LL+DFFNGKELN SINPDE +L G K E ++D GIETAGG
Sbjct: 350 LLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGIETAGG 409
Query: 181 VMTTLIKRN 207
VMT LI RN
Sbjct: 410 VMTNLIDRN 418
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 153 bits (371), Expect = 2e-37
Identities = 73/115 (63%), Positives = 90/115 (78%)
Frame = +3
Query: 255 NQPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEK 434
NQPGV IQV+EGERA T+DN+ LG FEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K
Sbjct: 435 NQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSAEDK 494
Query: 435 STNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALESYWLQ 599
ST K N+ITI N+KGRL++ +I+RM+ + E +R +A+N LE+Y Q
Sbjct: 495 STGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLEAYAFQ 549
Score = 69.3 bits (162), Expect = 3e-12
Identities = 36/69 (52%), Positives = 40/69 (57%)
Frame = +1
Query: 1 LLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 180
LL+DFFNGKELN SINPDE +L G K E ++D GIETAGG
Sbjct: 350 LLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGIETAGG 409
Query: 181 VMTTLIKRN 207
VMT LI RN
Sbjct: 410 VMTNLIDRN 418
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 151 bits (366), Expect = 6e-37
Identities = 71/115 (61%), Positives = 90/115 (78%)
Frame = +3
Query: 255 NQPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEK 434
NQPGV IQV+EGERA T+DN+ LG FELTGIPPAPRGVPQ++VTFDIDANGILNVSA +K
Sbjct: 435 NQPGVSIQVYEGERAMTRDNHRLGTFELTGIPPAPRGVPQVDVTFDIDANGILNVSAADK 494
Query: 435 STNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALESYWLQ 599
ST + N+ITI N+KGRLS+ +I+RM+ + E ++R ++N LE+Y Q
Sbjct: 495 STGRSNRITIRNEKGRLSQADIDRMVNEAKQFEREDAAQRDRISSRNQLEAYAFQ 549
Score = 65.3 bits (152), Expect = 6e-11
Identities = 33/69 (47%), Positives = 40/69 (57%)
Frame = +1
Query: 1 LLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 180
LL++FFNGK+LN SINPDE +L G K + ++D GIETAGG
Sbjct: 350 LLKEFFNGKDLNCSINPDEAVAFGAAVQAAVLSGVKDDTIKDVLLVDVVPLSHGIETAGG 409
Query: 181 VMTTLIKRN 207
VMT LI RN
Sbjct: 410 VMTNLIDRN 418
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 140 bits (338), Expect = 2e-33
Identities = 68/112 (60%), Positives = 82/112 (73%)
Frame = +3
Query: 255 NQPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEK 434
NQP V IQVFEGER TKDN+ LGKF+LTG+PPAPRGVPQIEVTF+ID NGIL+V+A +K
Sbjct: 462 NQPTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDK 521
Query: 435 STNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALESY 590
T +NKITI ND+ RLS E+IERM+ + + A+N LESY
Sbjct: 522 GTGNKNKITITNDQNRLSPEDIERMINDAEKFAEDDKKVKDKAEARNELESY 573
Score = 51.2 bits (117), Expect = 1e-06
Identities = 27/69 (39%), Positives = 37/69 (53%)
Frame = +1
Query: 1 LLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 180
L+++FFNGKE ++ INPDE ++ G+ E+ + GIET GG
Sbjct: 379 LIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGIETVGG 436
Query: 181 VMTTLIKRN 207
VMT LI RN
Sbjct: 437 VMTKLIGRN 445
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 137 bits (332), Expect = 9e-33
Identities = 67/112 (59%), Positives = 81/112 (72%)
Frame = +3
Query: 255 NQPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEK 434
NQP V IQVFEGER TKDN+ LGKF+LTG+PPAPRGVPQIEVTF+ID NGIL+V+A +K
Sbjct: 462 NQPTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDK 521
Query: 435 STNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALESY 590
T +NKITI ND+ RLS E+IE M+ + + A+N LESY
Sbjct: 522 GTGNKNKITITNDQNRLSPEDIEAMINDAEKFAEDDKKVKDKAEARNELESY 573
Score = 51.2 bits (117), Expect = 1e-06
Identities = 27/69 (39%), Positives = 37/69 (53%)
Frame = +1
Query: 1 LLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 180
L+++FFNGKE ++ INPDE ++ G+ E+ + GIET GG
Sbjct: 379 LIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGIETVGG 436
Query: 181 VMTTLIKRN 207
VMT LI RN
Sbjct: 437 VMTKLIGRN 445
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 122 bits (294), Expect = 3e-28
Identities = 59/115 (51%), Positives = 78/115 (67%)
Frame = +3
Query: 255 NQPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEK 434
+Q V I ++EGER DN+ LG F++TGIPPAPRGVPQIEVTF+ID NGIL+VSA +K
Sbjct: 90 SQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDK 149
Query: 435 STNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALESYWLQ 599
T +NK+TI ND RLS E+IERM+ +++ ++N LE+Y Q
Sbjct: 150 GTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELEAYAYQ 204
Score = 50.4 bits (115), Expect = 2e-06
Identities = 28/69 (40%), Positives = 35/69 (50%)
Frame = +1
Query: 1 LLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 180
L++D+FNGKE ++ INPDE ++ G E D GIET GG
Sbjct: 7 LIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLGIETVGG 64
Query: 181 VMTTLIKRN 207
VMT LI RN
Sbjct: 65 VMTKLIGRN 73
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 122 bits (294), Expect = 3e-28
Identities = 59/115 (51%), Positives = 78/115 (67%)
Frame = +3
Query: 255 NQPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEK 434
+Q V I ++EGER DN+ LG F++TGIPPAPRGVPQIEVTF+ID NGIL+VSA +K
Sbjct: 459 SQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDK 518
Query: 435 STNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALESYWLQ 599
T +NK+TI ND RLS E+IERM+ +++ ++N LE+Y Q
Sbjct: 519 GTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELEAYAYQ 573
Score = 50.4 bits (115), Expect = 2e-06
Identities = 28/69 (40%), Positives = 35/69 (50%)
Frame = +1
Query: 1 LLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 180
L++D+FNGKE ++ INPDE ++ G E D GIET GG
Sbjct: 376 LIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLGIETVGG 433
Query: 181 VMTTLIKRN 207
VMT LI RN
Sbjct: 434 VMTKLIGRN 442
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 107 bits (258), Expect = 8e-24
Identities = 52/85 (61%), Positives = 63/85 (74%)
Frame = +3
Query: 258 QPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEKS 437
Q V I+VF+GER N LLG+F L GIPPAPRGVPQ+EVTFDIDANGI+NVSA ++
Sbjct: 458 QTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRG 517
Query: 438 TNKENKITIXNDKGRLSKEEIERML 512
T KE +I I G LSK++IE M+
Sbjct: 518 TGKEQQIVI-QSSGGLSKDQIENMI 541
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +1
Query: 4 LQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGV 183
+Q+ F GK +K++NPDE +L GD V D GIET GG+
Sbjct: 378 VQEIF-GKVPSKAVNPDEAVAMGAAIQGAVLAGD----VTDVLLLDVTPLSLGIETLGGI 432
Query: 184 MTTLIKRN 207
MT LI RN
Sbjct: 433 MTKLITRN 440
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 55.2 bits (127), Expect = 6e-08
Identities = 35/110 (31%), Positives = 54/110 (49%)
Frame = +3
Query: 258 QPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEKS 437
Q + + V+EGER N LG+ L I P RG +++T ++D NGIL +A + +
Sbjct: 431 QTSINVPVYEGERVLCSHNRQLGEISLP-IQPKRRGESVVDITLEVDYNGILQATALDLN 489
Query: 438 TNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALES 587
T K TI D ++ EI+ M +S E R+ + R K +S
Sbjct: 490 TKKAITTTILYDCCTYTQPEIDE--MTSQSEEDRIFDEHFKMRYKQLQKS 537
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 55.2 bits (127), Expect = 6e-08
Identities = 35/110 (31%), Positives = 54/110 (49%)
Frame = +3
Query: 258 QPGVLIQVFEGERAXTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAXEKS 437
Q + + V+EGER N LG+ L I P RG +++T ++D NGIL +A + +
Sbjct: 431 QTSINVPVYEGERVLCSHNRQLGEISLP-IQPKRRGESVVDITLEVDYNGILQATALDLN 489
Query: 438 TNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALES 587
T K TI D ++ EI+ M +S E R+ + R K +S
Sbjct: 490 TKKAITTTILYDCCTYTQPEIDE--MTSQSEEDRIFDEHFKMRYKQLQKS 537
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +1
Query: 4 LQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGV 183
+Q+ F GK +K++NPDE +L GD V D GIET GG+
Sbjct: 378 VQEIF-GKVPSKAVNPDEAVAMGAAIQGAVLAGD----VTDVLLLDVTPLSLGIETLGGI 432
Query: 184 MTTLIKRN 207
MT LI RN
Sbjct: 433 MTKLITRN 440
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 258 QPGVLIQVFEGERAXTKDNNLLGKFELTGI 347
Q V I+VF+GER N LLG+F L GI
Sbjct: 458 QTQVQIKVFQGEREMATSNKLLGQFSLVGI 487
>L23651-5|AAU87829.1| 1127|Caenorhabditis elegans Nuclear pore complex
protein protein15 protein.
Length = 1127
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +2
Query: 512 NEAEKYRNEDDKQKETIQGQECIGILLA----SA*SLPWRMRSSRKRSLTLDXQTILDKC 679
+E + R+++D +K+TI G+ C ++ + S P M SR+ D T+LD+C
Sbjct: 992 DEWNRVRSKEDVEKKTIFGKFCNYLINSYPADKGDSFPIWMPISRRLIFPTDIDTVLDEC 1051
>Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical
protein F43G9.12 protein.
Length = 819
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 449 EQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKETIQGQE 574
E+D + Q L+ R+ ++EAE+ + +DD + E + Q+
Sbjct: 231 EEDRRREEQEGFLE-RENGDIDEAERIKGDDDSENEEWEKQQ 271
>Z79755-13|CAB02114.1| 819|Caenorhabditis elegans Hypothetical
protein F43G9.12 protein.
Length = 819
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 449 EQDHHXQRQRSSLQGRDRAYVNEAEKYRNEDDKQKETIQGQE 574
E+D + Q L+ R+ ++EAE+ + +DD + E + Q+
Sbjct: 231 EEDRRREEQEGFLE-RENGDIDEAERIKGDDDSENEEWEKQQ 271
>U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical
protein F57C12.2 protein.
Length = 556
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 423 AXEKSTNKENKITIXNDKGRLSKEEIERMLMRQRSTETRMTSKRRPSRAKNALESYWLQ 599
A K N++ +I N+K KEE + ++ E+ M ++ R + + E+ W Q
Sbjct: 96 AKTKIENQKKEINKLNEKVTQLKEEQQNSNQLSKNNESDMRNENRLAEVRKVQENVWRQ 154
>U23413-1|AAA64290.2| 182|Caenorhabditis elegans Hypothetical
protein B0353.1 protein.
Length = 182
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 149 PFPSVLRLLEVS*PH-SSSVTLPSPLNRLRHSPPTLKPTRSTHP 277
PF + + LE+S SS VT P+P PPT KPT HP
Sbjct: 101 PFSASMSTLELSSSTLSSPVTAPAP-----PPPPTSKPTVEVHP 139
>U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical
protein B0495.2 protein.
Length = 719
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 422 RYXEVHQQGEQDHHXQRQ----RSSLQGRDRAYVNEAEKYRNEDDKQKET 559
R +VH+ HH + + R++ RDR+ ++EK++ D+ K++
Sbjct: 125 RDQKVHEHRHHHHHRKHETDGHRTNRSNRDRSSERDSEKHKRHIDRHKKS 174
>Z68008-3|CAE17909.1| 97|Caenorhabditis elegans Hypothetical
protein R08B4.5 protein.
Length = 97
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 480 RLSKEEIERMLMRQRSTETRMTSKR 554
RLS + + R+LMR R T+T++ KR
Sbjct: 39 RLSNDALIRLLMRNRGTQTQLGLKR 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,665,075
Number of Sequences: 27780
Number of extensions: 340796
Number of successful extensions: 1210
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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