Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0447.Seq
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032606-1|AAH32606.1| 346|Homo sapiens KH domain containing, R... 81 4e-15
AF069681-1|AAC24857.1| 346|Homo sapiens T-Star protein. 81 4e-15
AF051322-1|AAC99295.1| 264|Homo sapiens Sam68-like phosphotyros... 81 4e-15
AF051321-1|AAC99294.1| 346|Homo sapiens Sam68-like phosphotyros... 81 4e-15
BC068536-1|AAH68536.1| 345|Homo sapiens KHDRBS3 protein protein. 80 6e-15
M88108-1|AAA59990.1| 443|Homo sapiens p62 protein. 78 3e-14
BC019109-1|AAH19109.1| 443|Homo sapiens KH domain containing, R... 78 3e-14
BC010132-1|AAH10132.1| 381|Homo sapiens KHDRBS1 protein protein. 78 3e-14
BC000717-1|AAH00717.1| 443|Homo sapiens KH domain containing, R... 78 3e-14
AL445248-2|CAH71945.1| 443|Homo sapiens KH domain containing, R... 78 3e-14
AL139249-2|CAI21972.1| 443|Homo sapiens KH domain containing, R... 78 3e-14
AK091346-1|BAC03643.1| 418|Homo sapiens protein ( Homo sapiens ... 78 3e-14
Z93021-1|CAI21649.1| 349|Homo sapiens KH domain containing, RNA... 77 4e-14
BC034043-1|AAH34043.1| 349|Homo sapiens KH domain containing, R... 77 4e-14
AY077838-1|AAL77219.1| 349|Homo sapiens Sam68-like mammalian pr... 77 4e-14
AL391644-1|CAI15262.1| 349|Homo sapiens KH domain containing, R... 77 4e-14
AL360220-1|CAH70882.1| 349|Homo sapiens KH domain containing, R... 77 4e-14
AL355347-1|CAI14907.1| 349|Homo sapiens KH domain containing, R... 77 4e-14
AL138882-1|CAI19748.1| 349|Homo sapiens KH domain containing, R... 77 4e-14
AL049544-1|CAI19918.1| 349|Homo sapiens KH domain containing, R... 77 4e-14
DQ323998-1|ABC88600.1| 333|Homo sapiens QKI protein. 44 5e-04
BC019917-1|AAH19917.1| 341|Homo sapiens quaking homolog, KH dom... 44 5e-04
BC012222-1|AAH12222.1| 293|Homo sapiens QKI protein protein. 44 5e-04
AY780788-1|AAV98358.1| 313|Homo sapiens quaking isoform protein. 44 5e-04
AL356119-3|CAI23024.1| 325|Homo sapiens quaking homolog, KH dom... 44 5e-04
AL356119-2|CAI23023.1| 319|Homo sapiens quaking homolog, KH dom... 44 5e-04
AL356119-1|CAI23022.1| 341|Homo sapiens quaking homolog, KH dom... 44 5e-04
AL031781-3|CAI21653.1| 325|Homo sapiens quaking homolog, KH dom... 44 5e-04
AL031781-2|CAI21652.1| 319|Homo sapiens quaking homolog, KH dom... 44 5e-04
AL031781-1|CAI21651.1| 341|Homo sapiens quaking homolog, KH dom... 44 5e-04
AK027309-1|BAB55032.1| 323|Homo sapiens protein ( Homo sapiens ... 44 5e-04
AF142422-1|AAF63417.1| 341|Homo sapiens QUAKING isoform 3 protein. 44 5e-04
AF142421-1|AAF63416.1| 337|Homo sapiens QUAKING isoform 5 protein. 44 5e-04
AF142420-1|AAF63415.1| 315|Homo sapiens QUAKING isoform 4 protein. 44 5e-04
AF142419-1|AAF63414.1| 363|Homo sapiens QUAKING isoform 6 protein. 44 5e-04
AF142418-1|AAF63413.1| 347|Homo sapiens QUAKING isoform 2 protein. 44 5e-04
AF142417-1|AAF63412.1| 321|Homo sapiens QUAKING isoform 1 protein. 44 5e-04
AB067808-1|BAB69681.1| 325|Homo sapiens RNA binding protein HQK... 44 5e-04
AB067801-1|BAB69499.1| 319|Homo sapiens RNA binding protein HQK... 44 5e-04
AB067800-1|BAB69498.1| 325|Homo sapiens RNA binding protein HQK... 44 5e-04
AB067799-1|BAB69497.1| 319|Homo sapiens RNA binding protein HQK... 44 5e-04
AB067798-1|BAB69496.1| 341|Homo sapiens RNA binding protein HQK... 44 5e-04
Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein. 44 7e-04
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 44 7e-04
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 44 7e-04
L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1... 44 7e-04
D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein. 44 7e-04
D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternativel... 44 7e-04
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 44 7e-04
BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein. 44 7e-04
BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein. 44 7e-04
BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein. 44 7e-04
AJ000051-1|CAA03883.1| 295|Homo sapiens splicing factor SF1 pro... 44 7e-04
AY237538-1|AAP04415.1| 1304|Homo sapiens KIF27C protein. 31 3.8
AY237537-1|AAP04414.1| 1335|Homo sapiens KIF27B protein. 31 3.8
AY237536-1|AAP04413.1| 1401|Homo sapiens KIF27A protein. 31 3.8
AL354733-4|CAI16013.1| 1401|Homo sapiens kinesin family member 2... 31 3.8
>BC032606-1|AAH32606.1| 346|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 3 protein.
Length = 346
Score = 81.0 bits (191), Expect = 4e-15
Identities = 45/116 (38%), Positives = 65/116 (56%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPK 435
EK L+ S F +++L++QE+ Q G + KY+DV + + PK
Sbjct: 12 EKDSLDPS-FTHALRLVNQEIEKFQ-KGEGKDEEKYIDVVINKNMKLGQKVLIPVKQFPK 69
Query: 436 FNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHLAD 603
FNFVGKLLGP GN++ LQE+TL +M++LG+GSM + LR+ K HL D
Sbjct: 70 FNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLND 125
>AF069681-1|AAC24857.1| 346|Homo sapiens T-Star protein.
Length = 346
Score = 81.0 bits (191), Expect = 4e-15
Identities = 45/116 (38%), Positives = 65/116 (56%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPK 435
EK L+ S F +++L++QE+ Q G + KY+DV + + PK
Sbjct: 12 EKDSLDPS-FTHALRLVNQEIEKFQ-KGEGKDEEKYIDVVINKNMKLGQKVLIPVKQFPK 69
Query: 436 FNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHLAD 603
FNFVGKLLGP GN++ LQE+TL +M++LG+GSM + LR+ K HL D
Sbjct: 70 FNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLND 125
>AF051322-1|AAC99295.1| 264|Homo sapiens Sam68-like phosphotyrosine
protein beta protein.
Length = 264
Score = 81.0 bits (191), Expect = 4e-15
Identities = 45/116 (38%), Positives = 65/116 (56%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPK 435
EK L+ S F +++L++QE+ Q G + KY+DV + + PK
Sbjct: 5 EKDSLDPS-FTHALRLVNQEIEKFQ-KGEGKDEEKYIDVVINKNMKLGQKVLIPVKQFPK 62
Query: 436 FNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHLAD 603
FNFVGKLLGP GN++ LQE+TL +M++LG+GSM + LR+ K HL D
Sbjct: 63 FNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLND 118
>AF051321-1|AAC99294.1| 346|Homo sapiens Sam68-like phosphotyrosine
protein alpha protein.
Length = 346
Score = 81.0 bits (191), Expect = 4e-15
Identities = 45/116 (38%), Positives = 65/116 (56%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPK 435
EK L+ S F +++L++QE+ Q G + KY+DV + + PK
Sbjct: 12 EKDSLDPS-FTHALRLVNQEIEKFQ-KGEGKDEEKYIDVVINKNMKLGQKVLIPVKQFPK 69
Query: 436 FNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHLAD 603
FNFVGKLLGP GN++ LQE+TL +M++LG+GSM + LR+ K HL D
Sbjct: 70 FNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLND 125
>BC068536-1|AAH68536.1| 345|Homo sapiens KHDRBS3 protein protein.
Length = 345
Score = 80.2 bits (189), Expect = 6e-15
Identities = 45/116 (38%), Positives = 65/116 (56%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPK 435
EK L+ S F +++L++QE+ Q K+ KY+DV + + PK
Sbjct: 12 EKDSLDPS-FTHALRLVNQEIEKFQKGEG--KEEKYIDVVINKNMKLGQKVLIPVKQFPK 68
Query: 436 FNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHLAD 603
FNFVGKLLGP GN++ LQE+TL +M++LG+GSM + LR+ K HL D
Sbjct: 69 FNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLND 124
>M88108-1|AAA59990.1| 443|Homo sapiens p62 protein.
Length = 443
Score = 77.8 bits (183), Expect = 3e-14
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDSK--YVDVFRDXXXXXXXXXXXXXXEH 429
EK L+ S F +M+L+ E+ +Q G KD + Y+D+F ++
Sbjct: 110 EKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMKLKERVLIPVKQY 167
Query: 430 PKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHL 597
PKFNFVGK+LGP GNT+ LQE+T +++VLG+GSM + LR+ PK +HL
Sbjct: 168 PKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHL 223
>BC019109-1|AAH19109.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 77.8 bits (183), Expect = 3e-14
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDSK--YVDVFRDXXXXXXXXXXXXXXEH 429
EK L+ S F +M+L+ E+ +Q G KD + Y+D+F ++
Sbjct: 110 EKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMKLKERVLIPVKQY 167
Query: 430 PKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHL 597
PKFNFVGK+LGP GNT+ LQE+T +++VLG+GSM + LR+ PK +HL
Sbjct: 168 PKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHL 223
>BC010132-1|AAH10132.1| 381|Homo sapiens KHDRBS1 protein protein.
Length = 381
Score = 77.8 bits (183), Expect = 3e-14
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDSK--YVDVFRDXXXXXXXXXXXXXXEH 429
EK L+ S F +M+L+ E+ +Q G KD + Y+D+F ++
Sbjct: 110 EKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMKLKERVLIPVKQY 167
Query: 430 PKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHL 597
PKFNFVGK+LGP GNT+ LQE+T +++VLG+GSM + LR+ PK +HL
Sbjct: 168 PKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHL 223
>BC000717-1|AAH00717.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 77.8 bits (183), Expect = 3e-14
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDSK--YVDVFRDXXXXXXXXXXXXXXEH 429
EK L+ S F +M+L+ E+ +Q G KD + Y+D+F ++
Sbjct: 110 EKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMKLKERVLIPVKQY 167
Query: 430 PKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHL 597
PKFNFVGK+LGP GNT+ LQE+T +++VLG+GSM + LR+ PK +HL
Sbjct: 168 PKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHL 223
>AL445248-2|CAH71945.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 77.8 bits (183), Expect = 3e-14
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDSK--YVDVFRDXXXXXXXXXXXXXXEH 429
EK L+ S F +M+L+ E+ +Q G KD + Y+D+F ++
Sbjct: 110 EKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMKLKERVLIPVKQY 167
Query: 430 PKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHL 597
PKFNFVGK+LGP GNT+ LQE+T +++VLG+GSM + LR+ PK +HL
Sbjct: 168 PKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHL 223
>AL139249-2|CAI21972.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 77.8 bits (183), Expect = 3e-14
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDSK--YVDVFRDXXXXXXXXXXXXXXEH 429
EK L+ S F +M+L+ E+ +Q G KD + Y+D+F ++
Sbjct: 110 EKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMKLKERVLIPVKQY 167
Query: 430 PKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHL 597
PKFNFVGK+LGP GNT+ LQE+T +++VLG+GSM + LR+ PK +HL
Sbjct: 168 PKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHL 223
>AK091346-1|BAC03643.1| 418|Homo sapiens protein ( Homo sapiens
cDNA FLJ34027 fis, clone FCBBF2003549, highly similar to
GAP-associated tyrosine phosphoprotein p62 (Sam68). ).
Length = 418
Score = 77.8 bits (183), Expect = 3e-14
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDSK--YVDVFRDXXXXXXXXXXXXXXEH 429
EK L+ S F +M+L+ E+ +Q G KD + Y+D+F ++
Sbjct: 85 EKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMKLKERVLIPVKQY 142
Query: 430 PKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHL 597
PKFNFVGK+LGP GNT+ LQE+T +++VLG+GSM + LR+ PK +HL
Sbjct: 143 PKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHL 198
>Z93021-1|CAI21649.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 77.4 bits (182), Expect = 4e-14
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDS--KYVDVFRDXXXXXXXXXXXXXXEH 429
EK L+ S F + +L+ +E+ Q S +D KY+DV + ++
Sbjct: 13 EKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERVLIPVKQY 71
Query: 430 PKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHLAD 603
PKFNFVGKLLGP GN++ LQE+T +M++LG+GSM + LR+ K +HL+D
Sbjct: 72 PKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSD 129
>BC034043-1|AAH34043.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 77.4 bits (182), Expect = 4e-14
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDS--KYVDVFRDXXXXXXXXXXXXXXEH 429
EK L+ S F + +L+ +E+ Q S +D KY+DV + ++
Sbjct: 13 EKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERVLIPVKQY 71
Query: 430 PKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHLAD 603
PKFNFVGKLLGP GN++ LQE+T +M++LG+GSM + LR+ K +HL+D
Sbjct: 72 PKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSD 129
>AY077838-1|AAL77219.1| 349|Homo sapiens Sam68-like mammalian
protein 1 protein.
Length = 349
Score = 77.4 bits (182), Expect = 4e-14
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDS--KYVDVFRDXXXXXXXXXXXXXXEH 429
EK L+ S F + +L+ +E+ Q S +D KY+DV + ++
Sbjct: 13 EKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERVPIPVKQY 71
Query: 430 PKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHLAD 603
PKFNFVGKLLGP GN++ LQE+T +M++LG+GSM + LR+ K +HL+D
Sbjct: 72 PKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSD 129
>AL391644-1|CAI15262.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 77.4 bits (182), Expect = 4e-14
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDS--KYVDVFRDXXXXXXXXXXXXXXEH 429
EK L+ S F + +L+ +E+ Q S +D KY+DV + ++
Sbjct: 13 EKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERVLIPVKQY 71
Query: 430 PKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHLAD 603
PKFNFVGKLLGP GN++ LQE+T +M++LG+GSM + LR+ K +HL+D
Sbjct: 72 PKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSD 129
>AL360220-1|CAH70882.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 77.4 bits (182), Expect = 4e-14
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDS--KYVDVFRDXXXXXXXXXXXXXXEH 429
EK L+ S F + +L+ +E+ Q S +D KY+DV + ++
Sbjct: 13 EKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERVLIPVKQY 71
Query: 430 PKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHLAD 603
PKFNFVGKLLGP GN++ LQE+T +M++LG+GSM + LR+ K +HL+D
Sbjct: 72 PKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSD 129
>AL355347-1|CAI14907.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 77.4 bits (182), Expect = 4e-14
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDS--KYVDVFRDXXXXXXXXXXXXXXEH 429
EK L+ S F + +L+ +E+ Q S +D KY+DV + ++
Sbjct: 13 EKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERVLIPVKQY 71
Query: 430 PKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHLAD 603
PKFNFVGKLLGP GN++ LQE+T +M++LG+GSM + LR+ K +HL+D
Sbjct: 72 PKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSD 129
>AL138882-1|CAI19748.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 77.4 bits (182), Expect = 4e-14
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDS--KYVDVFRDXXXXXXXXXXXXXXEH 429
EK L+ S F + +L+ +E+ Q S +D KY+DV + ++
Sbjct: 13 EKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERVLIPVKQY 71
Query: 430 PKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHLAD 603
PKFNFVGKLLGP GN++ LQE+T +M++LG+GSM + LR+ K +HL+D
Sbjct: 72 PKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSD 129
>AL049544-1|CAI19918.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 77.4 bits (182), Expect = 4e-14
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Frame = +1
Query: 256 EKIKLNNSKFPLSMKLIDQEVTXVQASGRITKDS--KYVDVFRDXXXXXXXXXXXXXXEH 429
EK L+ S F + +L+ +E+ Q S +D KY+DV + ++
Sbjct: 13 EKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERVLIPVKQY 71
Query: 430 PKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSMXXRXXXXXLRQXXXPKXSHLAD 603
PKFNFVGKLLGP GN++ LQE+T +M++LG+GSM + LR+ K +HL+D
Sbjct: 72 PKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSD 129
>DQ323998-1|ABC88600.1| 333|Homo sapiens QKI protein.
Length = 333
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 129
>BC019917-1|AAH19917.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 129
>BC012222-1|AAH12222.1| 293|Homo sapiens QKI protein protein.
Length = 293
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 44 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 81
>AY780788-1|AAV98358.1| 313|Homo sapiens quaking isoform protein.
Length = 313
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 88 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 125
>AL356119-3|CAI23024.1| 325|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 325
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 129
>AL356119-2|CAI23023.1| 319|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 319
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 129
>AL356119-1|CAI23022.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 129
>AL031781-3|CAI21653.1| 325|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 325
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 129
>AL031781-2|CAI21652.1| 319|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 319
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 129
>AL031781-1|CAI21651.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 129
>AK027309-1|BAB55032.1| 323|Homo sapiens protein ( Homo sapiens
cDNA FLJ14403 fis, clone HEMBA1003805, highly similar to
Mus musculus KH domain RNA binding protein QKI-5A mRNA.
).
Length = 323
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 74 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 111
>AF142422-1|AAF63417.1| 341|Homo sapiens QUAKING isoform 3 protein.
Length = 341
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 114 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 151
>AF142421-1|AAF63416.1| 337|Homo sapiens QUAKING isoform 5 protein.
Length = 337
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 88 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 125
>AF142420-1|AAF63415.1| 315|Homo sapiens QUAKING isoform 4 protein.
Length = 315
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 88 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 125
>AF142419-1|AAF63414.1| 363|Homo sapiens QUAKING isoform 6 protein.
Length = 363
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 114 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 151
>AF142418-1|AAF63413.1| 347|Homo sapiens QUAKING isoform 2 protein.
Length = 347
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 114 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 151
>AF142417-1|AAF63412.1| 321|Homo sapiens QUAKING isoform 1 protein.
Length = 321
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 88 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 125
>AB067808-1|BAB69681.1| 325|Homo sapiens RNA binding protein HQK
protein.
Length = 325
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 129
>AB067801-1|BAB69499.1| 319|Homo sapiens RNA binding protein HQK-7B
protein.
Length = 319
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 129
>AB067800-1|BAB69498.1| 325|Homo sapiens RNA binding protein HQK-7
protein.
Length = 325
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 129
>AB067799-1|BAB69497.1| 319|Homo sapiens RNA binding protein HQK-6
protein.
Length = 319
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 129
>AB067798-1|BAB69496.1| 341|Homo sapiens RNA binding protein HQK-5
protein.
Length = 341
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 424 EHPKFNFVGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
E+P FNFVG++LGP G T L+ +T ++ V G+GSM
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSM 129
>Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein.
Length = 638
Score = 43.6 bits (98), Expect = 7e-04
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +1
Query: 265 KLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 444
+LN +F KL ++ + + D K ++ E+P+ NF
Sbjct: 93 RLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINF 152
Query: 445 VGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
VG L+GP GNT+ ++++ ++ + G+GS+
Sbjct: 153 VGLLIGPRGNTLKNIEKECNAKIMIRGKGSV 183
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 43.6 bits (98), Expect = 7e-04
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +1
Query: 265 KLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 444
+LN +F KL ++ + + D K ++ E+P+ NF
Sbjct: 93 RLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINF 152
Query: 445 VGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
VG L+GP GNT+ ++++ ++ + G+GS+
Sbjct: 153 VGLLIGPRGNTLKNIEKECNAKIMIRGKGSV 183
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 43.6 bits (98), Expect = 7e-04
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +1
Query: 265 KLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 444
+LN +F KL ++ + + D K ++ E+P+ NF
Sbjct: 93 RLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINF 152
Query: 445 VGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
VG L+GP GNT+ ++++ ++ + G+GS+
Sbjct: 153 VGLLIGPRGNTLKNIEKECNAKIMIRGKGSV 183
>L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1
protein.
Length = 571
Score = 43.6 bits (98), Expect = 7e-04
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +1
Query: 265 KLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 444
+LN +F KL ++ + + D K ++ E+P+ NF
Sbjct: 93 RLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINF 152
Query: 445 VGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
VG L+GP GNT+ ++++ ++ + G+GS+
Sbjct: 153 VGLLIGPRGNTLKNIEKECNAKIMIRGKGSV 183
>D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein.
Length = 623
Score = 43.6 bits (98), Expect = 7e-04
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +1
Query: 265 KLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 444
+LN +F KL ++ + + D K ++ E+P+ NF
Sbjct: 93 RLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINF 152
Query: 445 VGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
VG L+GP GNT+ ++++ ++ + G+GS+
Sbjct: 153 VGLLIGPRGNTLKNIEKECNAKIMIRGKGSV 183
>D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternatively
spliced product protein.
Length = 548
Score = 43.6 bits (98), Expect = 7e-04
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +1
Query: 265 KLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 444
+LN +F KL ++ + + D K ++ E+P+ NF
Sbjct: 93 RLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINF 152
Query: 445 VGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
VG L+GP GNT+ ++++ ++ + G+GS+
Sbjct: 153 VGLLIGPRGNTLKNIEKECNAKIMIRGKGSV 183
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 43.6 bits (98), Expect = 7e-04
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +1
Query: 265 KLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 444
+LN +F KL ++ + + D K ++ E+P+ NF
Sbjct: 218 RLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINF 277
Query: 445 VGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
VG L+GP GNT+ ++++ ++ + G+GS+
Sbjct: 278 VGLLIGPRGNTLKNIEKECNAKIMIRGKGSV 308
>BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 43.6 bits (98), Expect = 7e-04
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +1
Query: 265 KLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 444
+LN +F KL ++ + + D K ++ E+P+ NF
Sbjct: 93 RLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINF 152
Query: 445 VGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
VG L+GP GNT+ ++++ ++ + G+GS+
Sbjct: 153 VGLLIGPRGNTLKNIEKECNAKIMIRGKGSV 183
>BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 43.6 bits (98), Expect = 7e-04
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +1
Query: 265 KLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 444
+LN +F KL ++ + + D K ++ E+P+ NF
Sbjct: 93 RLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINF 152
Query: 445 VGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
VG L+GP GNT+ ++++ ++ + G+GS+
Sbjct: 153 VGLLIGPRGNTLKNIEKECNAKIMIRGKGSV 183
>BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 43.6 bits (98), Expect = 7e-04
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +1
Query: 265 KLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 444
+LN +F KL ++ + + D K ++ E+P+ NF
Sbjct: 93 RLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINF 152
Query: 445 VGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
VG L+GP GNT+ ++++ ++ + G+GS+
Sbjct: 153 VGLLIGPRGNTLKNIEKECNAKIMIRGKGSV 183
>AJ000051-1|CAA03883.1| 295|Homo sapiens splicing factor SF1
protein.
Length = 295
Score = 43.6 bits (98), Expect = 7e-04
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +1
Query: 265 KLNNSKFPLSMKLIDQEVTXVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 444
+LN +F KL ++ + + D K ++ E+P+ NF
Sbjct: 93 RLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINF 152
Query: 445 VGKLLGPXGNTMXXLQEDTLXQMAVLGRGSM 537
VG L+GP GNT+ ++++ ++ + G+GS+
Sbjct: 153 VGLLIGPRGNTLKNIEKECNAKIMIRGKGSV 183
>AY237538-1|AAP04415.1| 1304|Homo sapiens KIF27C protein.
Length = 1304
Score = 31.1 bits (67), Expect = 3.8
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 98 LIKMADKYDKNGYNSGDFKRNTTQGKPEELDQ--NGEEGIKINEKAGEYMRELLTRRSNS 271
L K D+ K +N + +N PEE EEGI+ E A EY E + R S
Sbjct: 926 LQKEKDQLQKRRHNVDEKLKNGRVLSPEEEHVLFQLEEGIEALEAAIEYRNESIQNRQKS 985
Query: 272 IIQNFHYL 295
+ +FH L
Sbjct: 986 LRASFHNL 993
>AY237537-1|AAP04414.1| 1335|Homo sapiens KIF27B protein.
Length = 1335
Score = 31.1 bits (67), Expect = 3.8
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 98 LIKMADKYDKNGYNSGDFKRNTTQGKPEELDQ--NGEEGIKINEKAGEYMRELLTRRSNS 271
L K D+ K +N + +N PEE EEGI+ E A EY E + R S
Sbjct: 957 LQKEKDQLQKRRHNVDEKLKNGRVLSPEEEHVLFQLEEGIEALEAAIEYRNESIQNRQKS 1016
Query: 272 IIQNFHYL 295
+ +FH L
Sbjct: 1017 LRASFHNL 1024
>AY237536-1|AAP04413.1| 1401|Homo sapiens KIF27A protein.
Length = 1401
Score = 31.1 bits (67), Expect = 3.8
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 98 LIKMADKYDKNGYNSGDFKRNTTQGKPEELDQ--NGEEGIKINEKAGEYMRELLTRRSNS 271
L K D+ K +N + +N PEE EEGI+ E A EY E + R S
Sbjct: 1023 LQKEKDQLQKRRHNVDEKLKNGRVLSPEEEHVLFQLEEGIEALEAAIEYRNESIQNRQKS 1082
Query: 272 IIQNFHYL 295
+ +FH L
Sbjct: 1083 LRASFHNL 1090
>AL354733-4|CAI16013.1| 1401|Homo sapiens kinesin family member 27
protein.
Length = 1401
Score = 31.1 bits (67), Expect = 3.8
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 98 LIKMADKYDKNGYNSGDFKRNTTQGKPEELDQ--NGEEGIKINEKAGEYMRELLTRRSNS 271
L K D+ K +N + +N PEE EEGI+ E A EY E + R S
Sbjct: 1023 LQKEKDQLQKRRHNVDEKLKNGRVLSPEEEHVLFQLEEGIEALEAAIEYRNESIQNRQKS 1082
Query: 272 IIQNFHYL 295
+ +FH L
Sbjct: 1083 LRASFHNL 1090
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,956,429
Number of Sequences: 237096
Number of extensions: 1140053
Number of successful extensions: 1988
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1988
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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