Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0444.Seq
(612 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 148 9e-35
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 147 2e-34
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 140 3e-32
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 119 6e-26
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 118 1e-25
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 116 3e-25
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 116 6e-25
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 101 1e-20
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 99 7e-20
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 93 6e-18
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 85 2e-15
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 78 2e-13
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 64 3e-09
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 61 2e-08
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 59 7e-08
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 54 4e-06
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 37 0.33
UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa... 36 0.57
UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.76
UniRef50_Q23YC1 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 34 3.1
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 34 3.1
UniRef50_Q6UUI9 Cluster: Putative polyprotein; n=7; Oryza sativa... 33 5.3
UniRef50_O44519 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_Q48QA4 Cluster: ParB family protein; n=3; Proteobacteri... 33 7.1
UniRef50_A0N0V6 Cluster: Putative regulatory protein; n=2; Azoar... 33 7.1
UniRef50_Q9W3X1 Cluster: CG14440-PA; n=1; Drosophila melanogaste... 32 9.3
UniRef50_Q7YU58 Cluster: RE55548p; n=2; Sophophora|Rep: RE55548p... 32 9.3
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 148 bits (359), Expect = 9e-35
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +2
Query: 2 TNSRVRLLMSKGHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGN 181
T+ RVRLL+SKGHSCYRPRR G RKRKSVRGCI DANLSVL LVIV+KG ++IPGLTD
Sbjct: 69 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 128
Query: 182 VPRRLGPKRASKIRKLFNLSKEDD 253
VPRRLGPKRAS+IRKLFNLSKEDD
Sbjct: 129 VPRRLGPKRASRIRKLFNLSKEDD 152
Score = 70.9 bits (166), Expect = 2e-11
Identities = 43/81 (53%), Positives = 50/81 (61%)
Frame = +1
Query: 262 YVVKRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAK 441
YVV++ L KEGK KPR KAPKIQRLVTP VLQ AEYAK
Sbjct: 156 YVVRKPLN-KEGK---KPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAK 211
Query: 442 LLAQRKKESKVRRQEEIKRRR 504
LLA+R KE+K +RQE+I +RR
Sbjct: 212 LLAKRMKEAKEKRQEQIAKRR 232
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 147 bits (357), Expect = 2e-34
Identities = 73/112 (65%), Positives = 84/112 (75%), Gaps = 2/112 (1%)
Frame = +2
Query: 2 TNSRVRLLMSKGHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGN 181
TN RVRLL+SKGHSCYRPRR G RKRKSVRGCI D+ LSVL+LVIV+KG Q+IPGLTD
Sbjct: 69 TNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQDIPGLTDNT 128
Query: 182 VPRRLGPKRASKIRKLFNLSKEDD--DVVMSSNACSQPRKEKKMLNPDIRHL 331
+PRRLGPKR KIRK+FNLSKEDD V+ + K+ K P I+ L
Sbjct: 129 IPRRLGPKRVGKIRKMFNLSKEDDVRQYVIRRPLPEKEGKKAKSKAPKIQRL 180
Score = 72.9 bits (171), Expect = 5e-12
Identities = 39/81 (48%), Positives = 50/81 (61%)
Frame = +1
Query: 262 YVVKRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAK 441
YV++R LP KEGK K + KAPKIQRLVTPVVLQ A+YAK
Sbjct: 156 YVIRRPLPEKEGK---KAKSKAPKIQRLVTPVVLQRKRKRLALKRQRAQKCKQEAADYAK 212
Query: 442 LLAQRKKESKVRRQEEIKRRR 504
LLA+R KE+K +R E++ ++R
Sbjct: 213 LLAKRAKEAKEKRHEQLMKKR 233
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 140 bits (338), Expect = 3e-32
Identities = 64/84 (76%), Positives = 73/84 (86%)
Frame = +2
Query: 2 TNSRVRLLMSKGHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGN 181
TN+RVRLL+ KGHSCYRPRR G RKRKSVRGCI D NLS LAL++V+KG ++IPGLTD
Sbjct: 69 TNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTT 128
Query: 182 VPRRLGPKRASKIRKLFNLSKEDD 253
V RRLGPKRAS IRKL+NL+KEDD
Sbjct: 129 VLRRLGPKRASNIRKLYNLTKEDD 152
Score = 70.5 bits (165), Expect = 3e-11
Identities = 37/81 (45%), Positives = 48/81 (59%)
Frame = +1
Query: 262 YVVKRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAK 441
YVVKR LP K+GK KPR KAPKIQRL+TPVVLQ +EAEY K
Sbjct: 156 YVVKRPLPEKDGK---KPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMK 212
Query: 442 LLAQRKKESKVRRQEEIKRRR 504
+L R+++ ++RR+ + R
Sbjct: 213 ILHLRRRQERIRRRSRLSSMR 233
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 119 bits (286), Expect = 6e-26
Identities = 58/110 (52%), Positives = 72/110 (65%)
Frame = +2
Query: 2 TNSRVRLLMSKGHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGN 181
TN+RVRLL KG CYRPR+ G ++RKSVRGCI +LS L L +V+KG EIPGLTD
Sbjct: 110 TNNRVRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNEIPGLTDKA 169
Query: 182 VPRRLGPKRASKIRKLFNLSKEDDDVVMSSNACSQPRKEKKMLNPDIRHL 331
V ++LGPKRA+KIRKLFNL K DD + + + P I+ L
Sbjct: 170 VGKKLGPKRATKIRKLFNLDKTDDVRKYVIGRAISKNGKNRFIKPKIQRL 219
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 118 bits (283), Expect = 1e-25
Identities = 59/107 (55%), Positives = 74/107 (69%)
Frame = +2
Query: 11 RVRLLMSKGHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGNVPR 190
RVR+LM KGH YRPR+DG KRKS+RGCI ++ VLAL +V+KGA EI GLTD NVPR
Sbjct: 77 RVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPR 136
Query: 191 RLGPKRASKIRKLFNLSKEDDDVVMSSNACSQPRKEKKMLNPDIRHL 331
RLGPKR +K+R+LF K+ D V+ S Q +K+ P I+ L
Sbjct: 137 RLGPKRLTKLRRLFGF-KKADRVISSEEHGPQRYGKKRQKAPKIQRL 182
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 116 bits (280), Expect = 3e-25
Identities = 53/88 (60%), Positives = 65/88 (73%)
Frame = +2
Query: 11 RVRLLMSKGHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGNVPR 190
RVR+LM KGH YRPR+DG KRKS+RGCI ++ VLAL +V+KGA EI GLTD NVPR
Sbjct: 72 RVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPR 131
Query: 191 RLGPKRASKIRKLFNLSKEDDDVVMSSN 274
RLGPKR +K+R+LF K D ++ N
Sbjct: 132 RLGPKRLTKLRRLFGFKKADGVAIVQKN 159
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 116 bits (278), Expect = 6e-25
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = +2
Query: 11 RVRLLMSKGHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGNVPR 190
RVRLL+S+GHSC+ RR G RKRKSVRGCI ++ VLAL IV+KG EI GLT +PR
Sbjct: 72 RVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAEIDGLTTVTLPR 131
Query: 191 RLGPKRASKIRKLFNLSKEDDDVVMSSNACSQPRKEKK 304
+LGPKRA+ I+KLF L KEDD +++ + + K K
Sbjct: 132 KLGPKRANNIKKLFGLKKEDDPILIKKSVIRRTFKTAK 169
Score = 33.9 bits (74), Expect = 3.1
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 265 VVKRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKL 444
V++R +GK+ R K PKIQRL+TP + +++ EY K
Sbjct: 160 VIRRTFKTAKGKD----RTKCPKIQRLITPERILRKKVYKAEKTQRYVKTNAAKEEYEKF 215
Query: 445 LAQRKKE 465
L++ KK+
Sbjct: 216 LSEWKKQ 222
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 101 bits (243), Expect = 1e-20
Identities = 51/110 (46%), Positives = 68/110 (61%)
Frame = +2
Query: 2 TNSRVRLLMSKGHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGN 181
T R+RLL+ G SCYRPR+DG RKRK+VRGCI +S L V+++KG +EI GLT
Sbjct: 69 TPRRIRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKEIDGLTTTA 128
Query: 182 VPRRLGPKRASKIRKLFNLSKEDDDVVMSSNACSQPRKEKKMLNPDIRHL 331
VPRR GPKRAS +R +F ++ D S + K K +P ++ L
Sbjct: 129 VPRRFGPKRASTLRAMFGITDSKFDA--SKLVLKREVKPGKFTSPKVQRL 176
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 99.1 bits (236), Expect = 7e-20
Identities = 45/84 (53%), Positives = 63/84 (75%)
Frame = +2
Query: 2 TNSRVRLLMSKGHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGN 181
TN+RVRLL+ + CY+P R+G R+RK+VRG I ++SVL ++V+KG EI G+T+
Sbjct: 68 TNNRVRLLLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEIEGVTNDA 127
Query: 182 VPRRLGPKRASKIRKLFNLSKEDD 253
+P R GP+RAS RKLFNLS++DD
Sbjct: 128 LPMRAGPQRASHFRKLFNLSQKDD 151
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 92.7 bits (220), Expect = 6e-18
Identities = 44/78 (56%), Positives = 57/78 (73%)
Frame = +2
Query: 5 NSRVRLLMSKGHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGNV 184
+ R RLL+ +G CY RR+G RKRKS+RGCI +L L++V+V G + +PGLTD V
Sbjct: 76 SQRARLLLRQGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGLTDVVV 135
Query: 185 PRRLGPKRASKIRKLFNL 238
P+RL PKRASKIR+LF L
Sbjct: 136 PKRLVPKRASKIRRLFGL 153
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 84.6 bits (200), Expect = 2e-15
Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 NSRVRLLMSKGHSCYRPRR--DGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDG 178
+SRV LL+ +G + R G R+RK+VRGC+ ++++++ + I + G Q I G+TD
Sbjct: 71 SSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDT 130
Query: 179 NVPRRLGPKRASKIRKLFNLSKEDD 253
PRRLGPKRASKIRKLFNLS+ +D
Sbjct: 131 TAPRRLGPKRASKIRKLFNLSRTED 155
Score = 37.1 bits (82), Expect = 0.33
Identities = 28/83 (33%), Positives = 38/83 (45%)
Frame = +1
Query: 262 YVVKRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAK 441
YVV+R + K GK K R KAPKIQRL+TP V + EY +
Sbjct: 159 YVVRRRV-VKSGK---KDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLR 214
Query: 442 LLAQRKKESKVRRQEEIKRRRSV 510
L+A ++ + +R K R V
Sbjct: 215 LIASNRRALR-QRDHSKKHTRKV 236
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 77.8 bits (183), Expect = 2e-13
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Frame = +2
Query: 2 TNSRVRLLMSKGHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGN 181
T RVR L+SKG + YR RR G R+RKSVRG I + VL L+I+R G +EI GLT+
Sbjct: 54 TKKRVRPLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAV 113
Query: 182 VPRRLGPKRASKIRKLFNLSKEDDDVV-----MSSNACSQPRKEKKM 307
P++ K+RK+F + E+ +VV + + C P+K K+
Sbjct: 114 NDVSHLPRKEKKLRKMFGVPDEEKNVVGYIRNILKSECDDPKKIPKI 160
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 63.7 bits (148), Expect = 3e-09
Identities = 42/104 (40%), Positives = 59/104 (56%)
Frame = +2
Query: 2 TNSRVRLLMSKGHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGN 181
T+ R+RLL K HSC+ PR + RK K+VR +AN+S L LV+++K
Sbjct: 69 THGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS--------- 118
Query: 182 VPRRLGPKRASKIRKLFNLSKEDDDVVMSSNACSQPRKEKKMLN 313
P RLGP R+S I K++ L +EDD+V+ Q R +KK N
Sbjct: 119 -PCRLGPVRSSNISKIYYLCEEDDEVIPVK---LQRRHQKKRQN 158
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 61.3 bits (142), Expect = 2e-08
Identities = 41/101 (40%), Positives = 57/101 (56%)
Frame = +2
Query: 11 RVRLLMSKGHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGNVPR 190
R+RLL K HSC+ PR + RK K+VR +AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 191 RLGPKRASKIRKLFNLSKEDDDVVMSSNACSQPRKEKKMLN 313
RLGP R+S I K++ L +EDD+V+ Q R +KK N
Sbjct: 68 RLGPVRSSNISKIYYLCEEDDEVIPVK---LQRRHQKKRQN 105
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 59.3 bits (137), Expect = 7e-08
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +2
Query: 152 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD 253
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDD 113
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 53.6 bits (123), Expect = 4e-06
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 SRVRLLMSKGHSCYR--PRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGN 181
SRV++L+ KG + R + G R RKSVRGCI +SVL + ++ ++ +T+ N
Sbjct: 71 SRVKILLKKGSTGCRGYKMKKGERCRKSVRGCIVSPEISVLNIKLLTNKNDDLL-ITNKN 129
Query: 182 VPRRLGPKRASKIRKLFNLSKEDD 253
+ L KR+S +RK+ L+K DD
Sbjct: 130 SEKTLTHKRSSNLRKVLCLTKTDD 153
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 37.1 bits (82), Expect = 0.33
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 8 SRVRLLMSKGHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKG 148
+R RLL+S G +RP+ G RKRK VRG + ++ + V+V+ G
Sbjct: 71 ARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0676800 protein -
Oryza sativa subsp. japonica (Rice)
Length = 822
Score = 36.3 bits (80), Expect = 0.57
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +2
Query: 77 RKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKE--- 247
+KS + C N ++ LV++RKG + LT G + K S RK+ N+SK+
Sbjct: 227 KKSSQSCSGRLNSYIVVLVMLRKGGWKSQQLTIGLARHEVAVKIRSLNRKIENISKDRVF 286
Query: 248 ---DDDVVMSSNACSQPRKEKKMLNPDI 322
V S++ + RK +L P+I
Sbjct: 287 LTLKSTVPTGSSSVLRVRKSSHLLEPNI 314
>UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 165
Score = 35.9 bits (79), Expect = 0.76
Identities = 25/88 (28%), Positives = 36/88 (40%)
Frame = +2
Query: 35 GHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 214
GH+ R R R R+ GC DA L + A P RR+GP RA
Sbjct: 77 GHAEQRRGRHRRRYRREHAGCGIDAERRERRLTDASRRAVRAPLRRPVGARRRVGPCRAR 136
Query: 215 KIRKLFNLSKEDDDVVMSSNACSQPRKE 298
+++ L + V + C+QP +E
Sbjct: 137 RMKDLQGPCSDSRSGVPARRRCAQPGQE 164
>UniRef50_Q23YC1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1188
Score = 35.1 bits (77), Expect = 1.3
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 104 DANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD-DVVMSSNAC 280
+A + A + A+EI P ++ +K +LFN +DD ++ + +
Sbjct: 34 EAKNIIKAFIQTENDAEEIKSKALNKKPSYWKDQKDNKTDQLFNRKLDDDIELALERDVP 93
Query: 281 SQPRKEKKMLNPDIRHLR 334
QP K+ +LN ++RH +
Sbjct: 94 KQPEKDNVLLNMELRHAK 111
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 33.9 bits (74), Expect = 3.1
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 11 RVRLLMSKGHS-CYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGNVP 187
RV LL++ HS Y+P R S++ + +S+L +VI+ G ++IPG T P
Sbjct: 61 RVHLLLNNLHSYIYKPLRTREMNYTSLQDAVK-LPISLLNMVIIINGRKDIPGQTKRWAP 119
Query: 188 RR 193
+R
Sbjct: 120 KR 121
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 33.9 bits (74), Expect = 3.1
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +2
Query: 11 RVRLLMSKGHSCYRPRRDGXRKRKSVRG 94
RVR+L+SKG +RP+ G R++K+VRG
Sbjct: 83 RVRVLLSKGPG-FRPKEKGERRKKTVRG 109
>UniRef50_Q6UUI9 Cluster: Putative polyprotein; n=7; Oryza sativa
(japonica cultivar-group)|Rep: Putative polyprotein -
Oryza sativa subsp. japonica (Rice)
Length = 390
Score = 33.1 bits (72), Expect = 5.3
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 104 DANLSVLALVIVRKG--AQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDDVVMSSN 274
D N V+A + + G ++ IPG DG + + G +R + + L++ +DDD+V S+
Sbjct: 165 DVNGMVMAKLRIEVGERSKSIPGEDDGRLMKESGSERTAAVLALWSGRYDDDDMVTGSS 223
>UniRef50_O44519 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 442
Score = 33.1 bits (72), Expect = 5.3
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +2
Query: 53 PRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKL- 229
P RD R R V ANL VL + + + + + G+ +R+G A K K
Sbjct: 186 PARDERRPRSRVTIFNFSANLLVLCMDHLHRMVHLV--MMTGDAMKRIGQLFAEKFSKKT 243
Query: 230 -FNLSKEDDDVVMSSNACSQPRKEKKMLNPDIRHLRSRG 343
N + +DV S + + R+E+ D RSRG
Sbjct: 244 KLNFRRRTEDVDRSKDRSLKRREERSRSRQDRERDRSRG 282
>UniRef50_Q48QA4 Cluster: ParB family protein; n=3;
Proteobacteria|Rep: ParB family protein - Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
Length = 302
Score = 32.7 bits (71), Expect = 7.1
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 122 LALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDDVVMSSN-ACSQPRKE 298
+A I R +I L R K+ +K+R L L + D +V S SQ K+
Sbjct: 168 MATDIARSSESDIQNLLTDAYERGFKGKKITKLRHLLELRAKKDKLVRGSALGISQNNKK 227
Query: 299 KKMLNPDIRHLRSR 340
K++ D+R L R
Sbjct: 228 KRLTPADLRRLFER 241
>UniRef50_A0N0V6 Cluster: Putative regulatory protein; n=2; Azoarcus
anaerobius|Rep: Putative regulatory protein - Azoarcus
anaerobius
Length = 661
Score = 32.7 bits (71), Expect = 7.1
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 23 LMSKGHSCYRPRRDGXRKRKSVRGCIXDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGP 202
++ GH YR R +R+ D ++ + L ++R +E G D V R+LG
Sbjct: 582 IIKPGHLAYRMRDRRTPERQHAAASSRDQSIPAIQLDLIRSAIEEFNGNVD-LVGRKLGL 640
Query: 203 KRASKIRKL 229
RA+ R++
Sbjct: 641 SRATVYRRM 649
>UniRef50_Q9W3X1 Cluster: CG14440-PA; n=1; Drosophila
melanogaster|Rep: CG14440-PA - Drosophila melanogaster
(Fruit fly)
Length = 318
Score = 32.3 bits (70), Expect = 9.3
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 421 SEAEYAKLLAQRKKESKVRRQEEIKRRRSVQCVIPRALARVLRKSD 558
SEAEY LA+ + ++VRRQ E + +R+++ + A R+ R S+
Sbjct: 235 SEAEYRVRLAKNAEANRVRRQNETEVQRTLRLMKNAARQRLRRASE 280
>UniRef50_Q7YU58 Cluster: RE55548p; n=2; Sophophora|Rep: RE55548p -
Drosophila melanogaster (Fruit fly)
Length = 171
Score = 32.3 bits (70), Expect = 9.3
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 421 SEAEYAKLLAQRKKESKVRRQEEIKRRRSVQCVIPRALARVLRKSD 558
SEAEY LA+ + ++VRRQ E + +R+++ + A R+ R S+
Sbjct: 88 SEAEYRVRLAKNAEANRVRRQNETEVQRTLRLMKNAARQRLRRASE 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,395,950
Number of Sequences: 1657284
Number of extensions: 8957564
Number of successful extensions: 25929
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 24847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25887
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -