Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0444.Seq
         (612 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   1.5  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   4.4  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   5.9  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    23   7.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.8  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -1

Query: 180 FPSVNPGISWAPLRTITRAKTERLASXIHPR 88
           +P +  G + APLR+I   + +++A+ +HPR
Sbjct: 408 WPDLGVG-NMAPLRSIGLTELDQIAASMHPR 437


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 127 SCYCAQGCPGN 159
           +CYC   CPGN
Sbjct: 73  TCYCEGHCPGN 83


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 197 LDGGVHFHQSIQEFPGH 147
           +DGG++   S++ FPG+
Sbjct: 167 VDGGLNIPHSVKRFPGY 183


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +2

Query: 137 VRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSK 244
           V  GAQ++ G   G  P  + PK    IR     SK
Sbjct: 199 VYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSK 234


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 122 RPRDWRXQYIHELIYVFXLHRGAVCNMSGPLTSEDEHG 9
           +P+D+R   +  L  VF   +GA+ ++    T ED  G
Sbjct: 856 KPKDFRKHSLLPLNNVFDRIKGALPHLKKSPTKEDATG 893


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,699
Number of Sequences: 2352
Number of extensions: 9460
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)