Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0442.Seq
         (799 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   4.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   6.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   6.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 419 SKLILPFLTGFSESLLLAFVPVFVEATSTVF 327
           SKLI  F   F   LLL F   F+  T T+F
Sbjct: 862 SKLIRLFNEIFGHGLLLMFGISFLLVTQTIF 892



 Score = 22.6 bits (46), Expect = 3.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 419 SKLILPFLTGFSESLLLAFVPVFVEATSTVF 327
           SKL+  F   F   LLL F   F+  T T+F
Sbjct: 586 SKLVTRFNEIFGLGLLLMFGVSFLLITQTIF 616


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -3

Query: 419 SKLILPFLTGFSESLLLAFVPVFVEATSTVFRHMLRPDSQK 297
           SKL+  F   F   LLL F   F+  T  +F   +   S+K
Sbjct: 230 SKLVTRFNEIFGLGLLLMFAVSFLIITQVIFVICVLVQSEK 270


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 413 LILPFLTGFSESLLLAFVPVFVEATSTVFRHMLRPD 306
           L  PFL       L +FVP+ V A   +F + +  D
Sbjct: 174 LFYPFLPSDVSYNLFSFVPLVVNALDHLFLNDILSD 209


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 413 LILPFLTGFSESLLLAFVPVFVEATSTVFRHMLRPD 306
           L  PFL       L +FVP+ V A   +F + +  D
Sbjct: 130 LFYPFLPSDVSYNLFSFVPLVVNALDHLFLNDILSD 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,291
Number of Sequences: 336
Number of extensions: 3662
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)