Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0442.Seq
(799 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 177 1e-44
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 177 1e-44
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 177 1e-44
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 177 1e-44
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 177 1e-44
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 165 6e-41
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 140 2e-33
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 177 bits (432), Expect = 1e-44
Identities = 86/170 (50%), Positives = 107/170 (62%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 GVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIE 434
G VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY W D+LG+KSIE
Sbjct: 99 GAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIE 158
Query: 435 KDFKKMIRYCSVVRVIAHTQMKLLNSDKRRLTLWKSNLTVVPSRTK*NGAREHLEXPIPV 614
DF+KM+RYC V+RVIAH+Q++L+ +++ + + L K AREHLE PI V
Sbjct: 159 NDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQV 218
Query: 615 DSVFAQDEMXDCIGVTXGPRYXXVTSRXXHQXATPLXTQXA*XS-CCIGA 761
+VF QDEM DC+GVT G + VTSR H P T CIGA
Sbjct: 219 SNVFGQDEMIDCVGVTKGKGFKGVTSR-WHTKKLPRKTHKGLRKVACIGA 267
Score = 165 bits (401), Expect = 6e-41
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPXR 180
HRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE R
Sbjct: 14 HRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADR 73
Query: 181 PGSKINKKEIVEAVTIIETPPMVCV 255
PGSKINKKE+VEAVT++ETPPM+ V
Sbjct: 74 PGSKINKKEVVEAVTVLETPPMIVV 98
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 177 bits (432), Expect = 1e-44
Identities = 86/170 (50%), Positives = 107/170 (62%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 GVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIE 434
G VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY W D+LG+KSIE
Sbjct: 88 GAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIE 147
Query: 435 KDFKKMIRYCSVVRVIAHTQMKLLNSDKRRLTLWKSNLTVVPSRTK*NGAREHLEXPIPV 614
DF+KM+RYC V+RVIAH+Q++L+ +++ + + L K AREHLE PI V
Sbjct: 148 NDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQV 207
Query: 615 DSVFAQDEMXDCIGVTXGPRYXXVTSRXXHQXATPLXTQXA*XS-CCIGA 761
+VF QDEM DC+GVT G + VTSR H P T CIGA
Sbjct: 208 SNVFGQDEMIDCVGVTKGKGFKGVTSR-WHTKKLPRKTHKGLRKVACIGA 256
Score = 165 bits (401), Expect = 6e-41
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPXR 180
HRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE R
Sbjct: 3 HRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADR 62
Query: 181 PGSKINKKEIVEAVTIIETPPMVCV 255
PGSKINKKE+VEAVT++ETPPM+ V
Sbjct: 63 PGSKINKKEVVEAVTVLETPPMIVV 87
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 177 bits (432), Expect = 1e-44
Identities = 86/170 (50%), Positives = 107/170 (62%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 GVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIE 434
G VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY W D+LG+KSIE
Sbjct: 75 GAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIE 134
Query: 435 KDFKKMIRYCSVVRVIAHTQMKLLNSDKRRLTLWKSNLTVVPSRTK*NGAREHLEXPIPV 614
DF+KM+RYC V+RVIAH+Q++L+ +++ + + L K AREHLE PI V
Sbjct: 135 NDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQV 194
Query: 615 DSVFAQDEMXDCIGVTXGPRYXXVTSRXXHQXATPLXTQXA*XS-CCIGA 761
+VF QDEM DC+GVT G + VTSR H P T CIGA
Sbjct: 195 SNVFGQDEMIDCVGVTKGKGFKGVTSR-WHTKKLPRKTHKGLRKVACIGA 243
Score = 140 bits (339), Expect = 2e-33
Identities = 62/74 (83%), Positives = 67/74 (90%)
Frame = +1
Query: 34 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPXRPGSKINKKEIV 213
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE RPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 214 EAVTIIETPPMVCV 255
EAVT++ETPPM+ V
Sbjct: 61 EAVTVLETPPMIVV 74
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 177 bits (432), Expect = 1e-44
Identities = 86/170 (50%), Positives = 107/170 (62%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 GVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIE 434
G VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY W D+LG+KSIE
Sbjct: 75 GAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIE 134
Query: 435 KDFKKMIRYCSVVRVIAHTQMKLLNSDKRRLTLWKSNLTVVPSRTK*NGAREHLEXPIPV 614
DF+KM+RYC V+RVIAH+Q++L+ +++ + + L K AREHLE PI V
Sbjct: 135 NDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQV 194
Query: 615 DSVFAQDEMXDCIGVTXGPRYXXVTSRXXHQXATPLXTQXA*XS-CCIGA 761
+VF QDEM DC+GVT G + VTSR H P T CIGA
Sbjct: 195 SNVFGQDEMIDCVGVTKGKGFKGVTSR-WHTKKLPRKTHKGLRKVACIGA 243
Score = 140 bits (339), Expect = 2e-33
Identities = 62/74 (83%), Positives = 67/74 (90%)
Frame = +1
Query: 34 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPXRPGSKINKKEIV 213
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE RPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 214 EAVTIIETPPMVCV 255
EAVT++ETPPM+ V
Sbjct: 61 EAVTVLETPPMIVV 74
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 177 bits (432), Expect = 1e-44
Identities = 86/170 (50%), Positives = 107/170 (62%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 GVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIE 434
G VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY W D+LG+KSIE
Sbjct: 88 GAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIE 147
Query: 435 KDFKKMIRYCSVVRVIAHTQMKLLNSDKRRLTLWKSNLTVVPSRTK*NGAREHLEXPIPV 614
DF+KM+RYC V+RVIAH+Q++L+ +++ + + L K AREHLE PI V
Sbjct: 148 NDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQV 207
Query: 615 DSVFAQDEMXDCIGVTXGPRYXXVTSRXXHQXATPLXTQXA*XS-CCIGA 761
+VF QDEM DC+GVT G + VTSR H P T CIGA
Sbjct: 208 SNVFGQDEMIDCVGVTKGKGFKGVTSR-WHTKKLPRKTHKGLRKVACIGA 256
Score = 165 bits (401), Expect = 6e-41
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPXR 180
HRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE R
Sbjct: 3 HRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADR 62
Query: 181 PGSKINKKEIVEAVTIIETPPMVCV 255
PGSKINKKE+VEAVT++ETPPM+ V
Sbjct: 63 PGSKINKKEVVEAVTVLETPPMIVV 87
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 165 bits (401), Expect = 6e-41
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPXR 180
HRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE R
Sbjct: 3 HRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADR 62
Query: 181 PGSKINKKEIVEAVTIIETPPMVCV 255
PGSKINKKE+VEAVT++ETPPM+ V
Sbjct: 63 PGSKINKKEVVEAVTVLETPPMIVV 87
Score = 74.5 bits (175), Expect = 1e-13
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +3
Query: 255 GVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 362
G VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 88 GAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 140 bits (339), Expect = 2e-33
Identities = 62/74 (83%), Positives = 67/74 (90%)
Frame = +1
Query: 34 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPXRPGSKINKKEIV 213
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE RPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 214 EAVTIIETPPMVCV 255
EAVT++ETPPM+ V
Sbjct: 61 EAVTVLETPPMIVV 74
Score = 67.3 bits (157), Expect = 2e-11
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +3
Query: 255 GVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 356
G VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 75 GAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,120,706
Number of Sequences: 53049
Number of extensions: 717682
Number of successful extensions: 1577
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1566
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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