Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0439.Seq
         (908 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331407-1|AAQ97588.1|  101|Anopheles gambiae agCP14332 protein.       25   3.2  
AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.    24   5.5  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   5.5  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   9.7  

>AY331407-1|AAQ97588.1|  101|Anopheles gambiae agCP14332 protein.
          Length = 101

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
 Frame = +3

Query: 264 TPSSLSKESTPERNFN----ERVEAFNKI----NVKSNALNSMRSSLDSDIRIGHLSSSV 419
           TP +    + P RN++    +R    N++    NVK+ A N    ++    R G L  S 
Sbjct: 9   TPCTRRNRTAPARNYDTIPIDRWRVGNRMKEGRNVKNGAANLTPGNVRRRTRCGSLCGSP 68

Query: 420 ISRTLSNATD 449
           +SR  ++  D
Sbjct: 69  VSRAQTDDDD 78


>AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.
          Length = 156

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 204 FTKQHTEVFASLQTKIIQVYTPSSLSKESTP 296
           F +    V ASLQ  +   Y P+ L KE  P
Sbjct: 77  FQRARRVVIASLQNIVAYEYLPAFLDKEIPP 107


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 10/44 (22%), Positives = 23/44 (52%)
 Frame = +3

Query: 333 KINVKSNALNSMRSSLDSDIRIGHLSSSVISRTLSNATDYMKKD 464
           KIN + +ALN  R+   +  ++       + +  + A +Y+K++
Sbjct: 257 KINERVDALNEERTEKHNRCKLAEREMKDLEKPKTEAVEYLKQE 300


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +1

Query: 43  VRGPIVDLPEIKVQDSLTKSLHFKSEKNSNSSKLDKTNS---TKIVPLND 183
           + GP +D    +V     KS+HF   K++   +  +  S   T+ +PL D
Sbjct: 27  IPGPAIDRRREQVLQPRCKSVHFVIYKDTRGGRRVRAKSKAMTEFLPLCD 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 902,125
Number of Sequences: 2352
Number of extensions: 18648
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)